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Assembly Name: uagpf v2.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene14634 uagpf v2.0 667
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
Blast2go: transcription factor 0.0
unknown
uagpf_v2_unigene14651 uagpf v2.0 718
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 6.02558e-44
Blast2go: transcription factor bhlh96-like 0.0
Coding
uagpf_v2_unigene14677 uagpf v2.0 825
AutoFact: basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group] 2.00386e-43
Blast2go: protein 0.0
Coding
uagpf_v2_unigene14774 uagpf v2.0 663
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_89.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SMT7_VITVI 7.00005e-41
FL-Next: sp=Reticuline oxidase-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene14983 uagpf v2.0 771
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.99989e-22
C-terminus
uagpf_v2_unigene15350 uagpf v2.0 621
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
Blast2go: transcription factor bhlh62-like 0.0
unknown
uagpf_v2_unigene16532 uagpf v2.0 703
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 9.94922e-44
Blast2go: transcription factor bhlh63-like 0.0
unknown
uagpf_v2_unigene16554 uagpf v2.0 553
AutoFact: transcription factor bHLH113 [Arabidopsis thaliana] sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic helix-loop-helix protein 113; Short=AtbHLH113; Short=bHLH 113; AltName: Full=Transcription factor EN 61; AltName: F 2.0e-29
Blast2go: transcription factor bhlh113-like 0.0
unknown
uagpf_v2_unigene16579 uagpf v2.0 758
AutoFact: basic helix-loop-helix domain-containing protein [Arabidopsis thaliana] ref|XP_002893369.1| hypothetical protein ARALYDRAFT_472704 [Arabidopsis lyrata subsp. lyrata] dbj|BAC43682.1| unknown protein [Arabidopsis thaliana] gb|AAO42932.1| At1g26948 [Arabidop 1.0e-23
FL-Next: sp=Transcription factor bHLH135; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcription factor bhlh135-like 1.6316e-29
Complete
uagpf_v2_unigene16746 uagpf v2.0 1070
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh113-like 0.0
C-terminus
uagpf_v2_unigene17561 uagpf v2.0 768
AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 6.02558e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh96-like 0.0
Putative C-terminus
uagpf_v2_unigene17652 uagpf v2.0 994
AutoFact: HLH domain containing protein 4.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: inducer of cbf expression 1 0.0
C-terminus
uagpf_v2_unigene18713 uagpf v2.0 567
AutoFact: Helix-loop-helix DNA-binding [Medicago truncatula] 8.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh36 0.0
N-terminus
uagpf_v2_unigene19004 uagpf v2.0 772
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh36 0.0
C-terminus
uagpf_v2_unigene19120 uagpf v2.0 822
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 9.94922e-44
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transcription factor bhlh63-like 0.0
C-terminus
uagpf_v2_unigene25066 uagpf v2.0 507
AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene25132 uagpf v2.0 474
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
Blast2go: transcription factor bhlh66-like 0.0
Putative coding
uagpf_v2_unigene25363 uagpf v2.0 529
AutoFact: Basic helix-loop-helix family protein-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZL73_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: basic helix-loop-helix family protein 0.0
C-terminus
uagpf_v2_unigene25996 uagpf v2.0 518
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor egl1 0.0
Putative C-terminus
uagpf_v2_unigene26752 uagpf v2.0 398
AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 0.0
FL-Next: tr=JAMYC; Taxus cuspidata (Japanese yew). 0.0
Blast2go: transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain