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Assembly Name: uagpf v2.0

Name: Helix-loop-helix DNA-binding

Term: IPR011598  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene266 uagpf v2.0 1893
• AutoFact: transcription factor bHLH113 [Arabidopsis thaliana] sp|Q9LT67.1|BH113_ARATH RecName: Full=Transcription factor bHLH113; AltName: Full=Basic helix-loop-helix protein 113; Short=AtbHLH113; Short=bHLH 113; AltName: Full=Transcription factor EN 61; AltName: F 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh113-like 0.0
Complete
uagpf_v2_unigene370 uagpf v2.0 669
• AutoFact: HLH domain containing protein 4.0e-13
• Blast2go: transcription factor bim1 0.0
unknown
uagpf_v2_unigene665 uagpf v2.0 723
• AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
Complete
uagpf_v2_unigene1638 uagpf v2.0 713
• AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
• FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor bhlh30 0.0
C-terminus
uagpf_v2_unigene1702 uagpf v2.0 581
• AutoFact: transcription factor FAMA [Arabidopsis thaliana] sp|Q56YJ8.1|FAMA_ARATH RecName: Full=Transcription factor FAMA; AltName: Full=Basic helix-loop-helix protein 97; Short=AtbHLH97; Short=bHLH 97; AltName: Full=Transcription factor EN 14; AltName: Full=bHLH t 0.0
• Blast2go: transcription factor bhlh96-like 0.0
unknown
uagpf_v2_unigene2136 uagpf v2.0 699
• AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SSC2_RICCO 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 5.43334e-30
C-terminus
uagpf_v2_unigene2207 uagpf v2.0 401
• AutoFact: BHLH-like DNA binding protein n=2 Tax=Vitis vinifera RepID=B7SNG3_VITVI 0.0
• Blast2go: transcription factor tt8 0.0
unknown
uagpf_v2_unigene2458 uagpf v2.0 459
• AutoFact: WS0281.B21_D08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0281_D08 5, mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor tt8 0.0
Putative N-terminus
uagpf_v2_unigene2727 uagpf v2.0 391
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RRL5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh62-like 0.0
Internal
uagpf_v2_unigene3080 uagpf v2.0 311
• AutoFact: transcription factor bHLH66 [Arabidopsis thaliana] sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH 66; AltName: Full=Transcription factor EN 95; AltName: Full=b 9.94922e-44
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene3386 uagpf v2.0 607
• AutoFact: putative MYC transcription factor [Oryza sativa Japonica Group] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 0.0
C-terminus
uagpf_v2_unigene3443 uagpf v2.0 586
• AutoFact: transcription factor bHLH30 [Arabidopsis thaliana] sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH 30; AltName: Full=Transcription factor EN 53; AltName: Full=b 3.99931e-42
• FL-Next: sp=Transcription factor bHLH30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcription factor bhlh30 0.0
Internal
uagpf_v2_unigene3531 uagpf v2.0 449
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 5.0e-08
• Blast2go: transcription factor bhlh49 0.0
unknown
uagpf_v2_unigene3663 uagpf v2.0 496
• AutoFact: Myc2 bHLH protein n=2 Tax=Vitis vinifera RepID=A6NAB4_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh13-like 0.0
Internal
uagpf_v2_unigene4423 uagpf v2.0 571
• AutoFact: Helix-loop-helix DNA-binding n=2 Tax=Medicago truncatula RepID=Q2HVX8_MEDTR 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene4796 uagpf v2.0 758
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor egl1 0.0
Putative Complete
uagpf_v2_unigene6437 uagpf v2.0 560
• AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
• Blast2go: transcription factor bhlh66-like 0.0
unknown
uagpf_v2_unigene7128 uagpf v2.0 659
• AutoFact: bHLH transcription factor [Arabidopsis thaliana] 1.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8101 uagpf v2.0 643
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Putative Complete
uagpf_v2_unigene8236 uagpf v2.0 1442
• AutoFact: pfam00010, HLH, Helix-loop-helix DNA-binding domain 5.0e-08
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor bhlh49 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain