Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, LIM-type

Term: IPR001781  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene846 uagpf v2.0 458
AutoFact: Unassigned protein
Blast2go: protein 0.0
Coding
uagpf_v2_unigene2819 uagpf v2.0 1306
AutoFact: putative pollen specific LIM domain-containing protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen-specific protein 0.0
Complete
uagpf_v2_unigene3312 uagpf v2.0 344
AutoFact: LIM domain containing protein-like n=4 Tax=Oryza sativa RepID=Q5SMM0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
Internal
uagpf_v2_unigene6148 uagpf v2.0 602
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gata type zinc finger transcription factor-like protein 0.0
C-terminus
uagpf_v2_unigene6711 uagpf v2.0 695
AutoFact: LIM domain containing protein-like n=4 Tax=Oryza sativa RepID=Q5SMM0_ORYSJ 0.0
Blast2go: zinc ion binding 0.0
unknown
uagpf_v2_unigene7326 uagpf v2.0 1109
AutoFact: LIM domain containing protein-like n=4 Tax=Oryza sativa RepID=Q5SMM0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
N-terminus
uagpf_v2_unigene11476 uagpf v2.0 470
AutoFact: LIM domain protein WLIM-1 [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen-specific protein 0.0
Complete
uagpf_v2_unigene13619 uagpf v2.0 690
AutoFact: Unassigned protein
FL-Next: sp=BTB/POZ domain-containing protein At5g60050; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene15952 uagpf v2.0 1122
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 0.0
FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: gata type zinc finger transcription factor-like protein 0.0
Complete
uagpf_v2_unigene16207 uagpf v2.0 821
AutoFact: similar to zinc ion binding 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
C-terminus
uagpf_v2_unigene16422 uagpf v2.0 434
AutoFact: LIM domain protein WLIM-1 [Helianthus annuus] 0.0
Blast2go: pollen-specific protein 0.0
unknown
uagpf_v2_unigene27165 uagpf v2.0 481
AutoFact: LIM domain containing protein-like n=4 Tax=Oryza sativa RepID=Q5SMM0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc ion binding 0.0
Putative N-terminus
uagpf_v2_unigene37923 uagpf v2.0 474
AutoFact: LIM domain protein WLIM-1 [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen-specific protein 0.0
Putative Complete
uagpf_v2_unigene38513 uagpf v2.0 399
AutoFact: similar to zinc ion binding 0.0
Blast2go: zinc ion binding 0.0
unknown
uagpf_v2_unigene45417 uagpf v2.0 341
AutoFact: WS02840.CR_K08 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS02840_K08 3', mRNA sequence. 0.0
FL-Next: sp=BTB/POZ domain-containing protein At2g13690; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene49847 uagpf v2.0 527
AutoFact: LIM domain protein WLIM-1 [Helianthus annuus] 0.0
Blast2go: pollen-specific protein 0.0
unknown
uagpf_v2_unigene53744 uagpf v2.0 387
AutoFact: Lim domain protein n=2 Tax=Pinaceae RepID=F4MKL9_PINPS 2.0e-25
FL-Next: tr=Lim domain protein; Pinus pinaster (Maritime pine). 0.0
Blast2go: lim domain-containing protein 3.54631e-32
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain