Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Beta tubulin, autoregulation binding site

Term: IPR013838  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene25108 uagpf v2.0 387
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] 1.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.71296e-27
Internal
uagpf_v2_unigene25309 uagpf v2.0 333
AutoFact: exosome complex component RRP4 [Arabidopsis thaliana] gb|AAC72108.1| Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharomyces pombe cosmid gb|Z50142 [Arabidopsis thaliana] gb|AAQ65156.1| At1g03360 [Arabidopsis thaliana] dbj|BAD43995 0.0
Blast2go: exosome complex component rrp4-like 0.0
unknown
uagpf_v2_unigene25479 uagpf v2.0 543
AutoFact: tRNA-dihydrouridine synthase 4 [Arabidopsis thaliana] dbj|BAB10956.1| unnamed protein product [Arabidopsis thaliana] gb|AAK83641.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gb|AAM26724.1| AT5g67220/K21H1_18 [Arabidopsis thaliana] gb|AED98315.1| tRNA-dihy 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g029830; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene26264 uagpf v2.0 327
AutoFact: DUF868 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene26399 uagpf v2.0 348
AutoFact: CTC-interacting domain 9 protein [Arabidopsis thaliana] dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana] gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ctc-interacting domain 8 protein 0.0
Internal
uagpf_v2_unigene27003 uagpf v2.0 541
AutoFact: Alpha-6-galactosyltransferase n=2 Tax=Trifolieae RepID=Q5TIN0_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: galactomannan galactosyltransferase 0.0
C-terminus
uagpf_v2_unigene27191 uagpf v2.0 353
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RZ39_RICCO 0.0
Blast2go: nac domain ipr003441 0.0
unknown
uagpf_v2_unigene27746 uagpf v2.0 494
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene27921 uagpf v2.0 305
AutoFact: NAM protein n=1 Tax=Petunia x hybrida RepID=Q40880_PETHY 6.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein cup-shaped cotyledon 2-like 2.47863e-19
Putative N-terminus
uagpf_v2_unigene27949 uagpf v2.0 371
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
Blast2go: beta chain 0.0
unknown
uagpf_v2_unigene28024 uagpf v2.0 486
AutoFact: putative RNA-binding protein RBP37 [Oryza sativa Japonica Group] dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group] dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza s 0.0
Blast2go: rna-binding protein 0.0
Coding
uagpf_v2_unigene28059 uagpf v2.0 364
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene28188 uagpf v2.0 420
AutoFact: Cu2+-exporting ATPase [Arabidopsis thaliana] sp|Q9SH30.2|AHM7_ARATH RecName: Full=Putative copper-transporting ATPase 3 gb|ACF95837.1| heavy metal P-type ATPase [Arabidopsis thaliana] gb|ACF95838.1| heavy metal P-type ATPase [Arabidopsis thaliana] gb|ACF9 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heavy metal atpase 0.0
C-terminus
uagpf_v2_unigene28278 uagpf v2.0 419
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3 0.0
Internal
uagpf_v2_unigene28380 uagpf v2.0 413
AutoFact: Somatic embryogenesis receptor-like kinase 1 n=2 Tax=Coniferales RepID=D1MEH6_9CONI 0.0
Blast2go: somatic embryogenesis receptor kinase 0.0
Putative coding
uagpf_v2_unigene28780 uagpf v2.0 392
AutoFact: pfam05691, Raffinose_syn, Raffinose synthase or seed inhibition protein Sip1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alkaline alpha galactosidase 0.0
Putative N-terminus
uagpf_v2_unigene28809 uagpf v2.0 249
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SJP9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene28923 uagpf v2.0 451
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene29053 uagpf v2.0 412
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene29093 uagpf v2.0 440
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
Blast2go: sin3 histone deacetylase complex 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain