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Assembly Name: uagpf v2.0

Name: Histone core

Term: IPR007125  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene28713 uagpf v2.0 563
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 4.99983e-42
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
uagpf_v2_unigene28736 uagpf v2.0 346
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99995e-41
Blast2go: histone h2b like protein 0.0
unknown
uagpf_v2_unigene30636 uagpf v2.0 498
AutoFact: PREDICTED: histone H3.2-like n=1 Tax=Danio rerio RepID=UPI0001CF207B 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
C-terminus
uagpf_v2_unigene31062 uagpf v2.0 208
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
Blast2go: histone h4 0.0
unknown
uagpf_v2_unigene31324 uagpf v2.0 786
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.00386e-43
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
C-terminus
uagpf_v2_unigene31786 uagpf v2.0 334
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
C-terminus
uagpf_v2_unigene37409 uagpf v2.0 429
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
Blast2go: histone h2b like protein 0.0
unknown
uagpf_v2_unigene37992 uagpf v2.0 385
AutoFact: histone H4 [Hyacinthus orientalis] 5.0e-38
Blast2go: histone h4 0.0
unknown
uagpf_v2_unigene38246 uagpf v2.0 416
AutoFact: Histone H2A n=1 Tax=Sorghum bicolor RepID=C5YYL4_SORBI 2.0e-28
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.74626e-36
N-terminus
uagpf_v2_unigene40715 uagpf v2.0 445
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
C-terminus
uagpf_v2_unigene41488 uagpf v2.0 206
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
Blast2go: histone h2b like protein 0.0
Coding
uagpf_v2_unigene41695 uagpf v2.0 313
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.99997e-41
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene41924 uagpf v2.0 192
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene42794 uagpf v2.0 256
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: h2b5_wheat ame: full=histone ame: full=wch2b-6 9.25196e-11
N-terminus
uagpf_v2_unigene43727 uagpf v2.0 149
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U534_PHYPA 2.0e-24
Blast2go: cenh3 1.87561e-29
unknown
uagpf_v2_unigene49095 uagpf v2.0 121
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene49600 uagpf v2.0 804
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.00001e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a variant 1 0.0
Putative Complete
uagpf_v2_unigene51010 uagpf v2.0 813
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Complete
uagpf_v2_unigene51199 uagpf v2.0 422
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
Blast2go: probable carboxylesterase 11-like 0.0
unknown
uagpf_v2_unigene52094 uagpf v2.0 460
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
FL-Next: tr=PrMC3; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: probable carboxylesterase 11-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain