Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Histone H2B

Term: IPR000558  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene49095 uagpf v2.0 121
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene51424 uagpf v2.0 462
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52805 uagpf v2.0 611
AutoFact: leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana] sp|Q9LHF1.1|LRX4_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 4; Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene53221 uagpf v2.0 507
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
unknown
uagpf_v2_unigene53488 uagpf v2.0 314
AutoFact: Histone H2B.4 n=7 Tax=Arabidopsis RepID=H2B4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Putative N-terminus
uagpf_v2_unigene53844 uagpf v2.0 317
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene54263 uagpf v2.0 420
AutoFact: PREDICTED: similar to retinitis pigmentosa 1-like 1 protein [Gallus gallus] 3.0e-05
Blast2go: unnamed protein product [Vitis vinifera] 1.6783e-12
unknown
uagpf_v2_unigene54648 uagpf v2.0 682
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene55539 uagpf v2.0 779
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
uagpf_v2_unigene55742 uagpf v2.0 1041
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable histone -like 0.0
Complete
uagpf_v2_unigene55806 uagpf v2.0 611
AutoFact: Histone H2B (Fragment) n=1 Tax=Asparagus officinalis RepID=Q43724_ASPOF 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 9.35927e-42
C-terminus
uagpf_v2_unigene55871 uagpf v2.0 424
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
N-terminus
uagpf_v2_unigene55897 uagpf v2.0 370
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2 0.0
C-terminus
uagpf_v2_unigene55911 uagpf v2.0 669
AutoFact: Histone H2B n=2 Tax=Volvox carteri f. nagariensis RepID=D8TP19_VOLCA 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 2.49241e-25
C-terminus
uagpf_v2_unigene55919 uagpf v2.0 449
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable histone -like 0.0
Putative Complete
uagpf_v2_unigene55920 uagpf v2.0 289
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable histone -like 0.0
Putative N-terminus
uagpf_v2_unigene55929 uagpf v2.0 714
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene55933 uagpf v2.0 401
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
N-terminus
uagpf_v2_unigene55941 uagpf v2.0 395
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
N-terminus
uagpf_v2_unigene55962 uagpf v2.0 412
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Putative N-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain