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Assembly Name: uagpf v2.0

Name: Histone H2B

Term: IPR000558  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20377 uagpf v2.0 720
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable histone -like 0.0
Complete
uagpf_v2_unigene20389 uagpf v2.0 772
AutoFact: Histone H2B.5 n=60 Tax=Magnoliophyta RepID=H2B5_ORYSJ 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene20398 uagpf v2.0 770
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 3.00004e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene20403 uagpf v2.0 606
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2 0.0
Complete
uagpf_v2_unigene20406 uagpf v2.0 537
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
Complete
uagpf_v2_unigene20408 uagpf v2.0 612
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 4.00001e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene20410 uagpf v2.0 714
AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Complete
uagpf_v2_unigene20414 uagpf v2.0 709
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99965e-42
FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2b 0.0
C-terminus
uagpf_v2_unigene27596 uagpf v2.0 510
AutoFact: Histone H2B.3 n=41 Tax=Spermatophyta RepID=H2B3_ARATH 4.99983e-42
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene27888 uagpf v2.0 335
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene28234 uagpf v2.0 323
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene28251 uagpf v2.0 208
AutoFact: Unassigned protein
Coding
uagpf_v2_unigene28330 uagpf v2.0 403
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene28736 uagpf v2.0 346
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99995e-41
Blast2go: histone h2b like protein 0.0
unknown
uagpf_v2_unigene32688 uagpf v2.0 402
AutoFact: Leucine-rich repeat extensin-like protein 3 n=1 Tax=Arabidopsis thaliana RepID=LRX3_ARATH 0.0
FL-Next: sp=Leucine-rich repeat extensin-like protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene36400 uagpf v2.0 563
AutoFact: leucine-rich repeat extensin-like protein 3 [Arabidopsis thaliana] sp|Q9T0K5.1|LRX3_ARATH RecName: Full=Leucine-rich repeat extensin-like protein 3; Short=AtLRX3; Short=LRR/EXTENSIN3; AltName: Full=Cell wall hydroxyproline-rich glycoprotein; Flags: Precur 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene37409 uagpf v2.0 429
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 1.99993e-41
Blast2go: histone h2b like protein 0.0
unknown
uagpf_v2_unigene41488 uagpf v2.0 206
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
Blast2go: histone h2b like protein 0.0
Coding
uagpf_v2_unigene41695 uagpf v2.0 313
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.99997e-41
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene42794 uagpf v2.0 256
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: h2b5_wheat ame: full=histone ame: full=wch2b-6 9.25196e-11
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain