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Assembly Name: uagpf v2.0

Name: Small GTP-binding protein domain

Term: IPR005225  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37103 uagpf v2.0 690
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
N-terminus
uagpf_v2_unigene37524 uagpf v2.0 435
AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 0.0
Blast2go: rab11 -family small gtpase 0.0
Putative coding
uagpf_v2_unigene37967 uagpf v2.0 419
AutoFact: Elongation factor 1-alpha, putative n=1 Tax=Ricinus communis RepID=B9SPP6_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
Putative N-terminus
uagpf_v2_unigene38044 uagpf v2.0 339
AutoFact: Mitochondrial elongation factor G [Oryza sativa Japonica Group] gb|EAZ27513.1| hypothetical protein OsJ_11462 [Oryza sativa Japonica Group] 4.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.07631e-33
Internal
uagpf_v2_unigene38120 uagpf v2.0 388
AutoFact: Os07g0522900 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q0D5Z4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb02g034970; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: septum-promoting gtp-binding protein 1-like 0.0
C-terminus
uagpf_v2_unigene38308 uagpf v2.0 393
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
Internal
uagpf_v2_unigene38766 uagpf v2.0 301
AutoFact: Mitochondrial translational initiation factor, putative n=1 Tax=Ricinus communis RepID=B9RCM3_RICCO 0.0
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Porphyra purpurea. Plastid; Chloroplast. 0.0
Blast2go: translation initiation factor if-2 0.0
Internal
uagpf_v2_unigene39035 uagpf v2.0 310
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
Blast2go: rab gtpase-like protein a4d 0.0
unknown
uagpf_v2_unigene39609 uagpf v2.0 444
AutoFact: GTPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba5d-like 0.0
N-terminus
uagpf_v2_unigene40628 uagpf v2.0 390
AutoFact: GTP-binding protein era, putative n=1 Tax=Ricinus communis RepID=B9S6C9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase era-like 0.0
Internal
uagpf_v2_unigene42655 uagpf v2.0 336
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
C-terminus
uagpf_v2_unigene42745 uagpf v2.0 308
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
Blast2go: rab11 -family small gtpase 0.0
unknown
uagpf_v2_unigene43516 uagpf v2.0 207
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
Blast2go: rop-family small gtpase 0.0
unknown
uagpf_v2_unigene43916 uagpf v2.0 310
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab7 -family small gtpase 2.8026e-45
N-terminus
uagpf_v2_unigene44392 uagpf v2.0 348
AutoFact: Elongation factor Tu n=4 Tax=Oryza sativa RepID=Q6ZI53_ORYSJ 0.0
Blast2go: elongation factor tu 0.0
unknown
uagpf_v2_unigene44559 uagpf v2.0 228
AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=3 Tax=Populus RepID=B9HUR7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sulfate bicarbonate oxalate exchanger and transporter sat-1 0.0
Putative C-terminus
uagpf_v2_unigene46668 uagpf v2.0 205
AutoFact: GN3L_Grn1 multi-domain protein 2.0e-22
Coding
uagpf_v2_unigene46858 uagpf v2.0 266
AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
Blast2go: ras-related protein rab7 0.0
unknown
uagpf_v2_unigene47039 uagpf v2.0 358
AutoFact: GTP1/OBG family protein [Arabidopsis thaliana] gb|AAM91598.1| GTP-binding protein obg-like [Arabidopsis thaliana] gb|AAP37780.1| At5g18570 [Arabidopsis thaliana] gb|AED92580.1| GTP1/OBG family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp1 obg family protein 0.0
Internal
uagpf_v2_unigene47591 uagpf v2.0 353
AutoFact: developmentally regulated G-protein 1 [Arabidopsis thaliana] ref|NP_001077555.1| developmentally regulated G-protein 1 [Arabidopsis thaliana] gb|AAF97313.1|AC007843_16 GTP binding protein [Arabidopsis thaliana] gb|AAX12862.1| At1g17470 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: developmentally regulated g-protein 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain