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Assembly Name: uagpf v2.0

Name: Small GTP-binding protein domain

Term: IPR005225  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene25696 uagpf v2.0 334
AutoFact: Translation elongation factor, putative n=1 Tax=Ricinus communis RepID=B9RPP6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Internal
uagpf_v2_unigene25703 uagpf v2.0 434
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031270.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031271.1| P-loop containing nucleoside triphospha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
N-terminus
uagpf_v2_unigene25831 uagpf v2.0 433
AutoFact: GTP-binding protein era, putative n=1 Tax=Ricinus communis RepID=B9S6C9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase era-like 0.0
C-terminus
uagpf_v2_unigene25843 uagpf v2.0 834
AutoFact: putative GTP-binding protein [Arabidopsis thaliana] emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gb|AED91684.1| puta 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
N-terminus
uagpf_v2_unigene25850 uagpf v2.0 359
AutoFact: Probable protein phosphatase 2C 59 n=5 Tax=Magnoliophyta RepID=P2C59_ARATH 0.0
Blast2go: protein phosphatase 2c 0.0
unknown
uagpf_v2_unigene26596 uagpf v2.0 408
AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
Blast2go: small gtpase 0.0
unknown
uagpf_v2_unigene26696 uagpf v2.0 378
AutoFact: small GTP-binding protein [Mesembryanthemum crystallinum] 0.0
Blast2go: rab family gtpase 0.0
Putative coding
uagpf_v2_unigene26815 uagpf v2.0 413
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene27109 uagpf v2.0 308
AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab gtpase homolog g3a 0.0
C-terminus
uagpf_v2_unigene27555 uagpf v2.0 306
AutoFact: Protein phosphatase 2C n=2 Tax=Physcomitrella patens RepID=B1B5N7_9BRYO 0.0
Blast2go: protein phosphatase 2c 0.0
Coding
uagpf_v2_unigene27556 uagpf v2.0 292
AutoFact: putative high affinity sulfate transporter [Oryza sativa Japonica Group] gb|EAZ42685.1| hypothetical protein OsJ_27252 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sulfate transporter 0.0
Internal
uagpf_v2_unigene27559 uagpf v2.0 523
AutoFact: Sulfate/bicarbonate/oxalate exchanger and transporter sat-1 n=3 Tax=Populus RepID=B9HUR7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sulfate bicarbonate oxalate exchanger and transporter sat-1 0.0
Internal
uagpf_v2_unigene27866 uagpf v2.0 349
AutoFact: putative GTP-binding protein (ISS) [Ostreococcus tauri] emb|CAL54661.1| putative GTP-binding protein (ISS) [Ostreococcus tauri] 2.0e-33
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: gtpase obg-like 0.0
C-terminus
uagpf_v2_unigene28008 uagpf v2.0 290
AutoFact: ADP-ribosylation factor B1B n=11 Tax=core eudicotyledons RepID=Q9LFJ7_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 0.0
Putative C-terminus
uagpf_v2_unigene28019 uagpf v2.0 425
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: sp=Elongation factor 2; Blastocystis hominis. 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Internal
uagpf_v2_unigene28877 uagpf v2.0 607
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab11 -family small gtpase 0.0
C-terminus
uagpf_v2_unigene29391 uagpf v2.0 423
AutoFact: putative GTP-binding protein [Arabidopsis thaliana] emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gb|AED91684.1| puta 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
C-terminus
uagpf_v2_unigene29400 uagpf v2.0 330
AutoFact: Mitochondrial translational initiation factor, putative n=1 Tax=Ricinus communis RepID=B9RCM3_RICCO 0.0
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: translation initiation factor if-2 0.0
Internal
uagpf_v2_unigene29463 uagpf v2.0 277
AutoFact: GTP-binding protein-relatedlike protein n=2 Tax=Arabidopsis RepID=Q9SVA6_ARATH 0.0
Blast2go: developmentally-regulated gtp-binding protein 1 0.0
unknown
uagpf_v2_unigene30958 uagpf v2.0 256
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 1.0e-30
FL-Next: tr=Elongation factor 1-alpha, putative; Ricinus communis (Castor bean). 0.0
Blast2go: elongation factor 1-alpha 1.24836e-34
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain