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Assembly Name: uagpf v2.0

Name: Small GTP-binding protein domain

Term: IPR005225  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene12729 uagpf v2.0 495
• AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp binding protein 0.0
N-terminus
uagpf_v2_unigene12868 uagpf v2.0 1280
• AutoFact: Ras-related protein RABA1f n=29 Tax=Spermatophyta RepID=RAA1F_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein 0.0
Complete
uagpf_v2_unigene12883 uagpf v2.0 868
• AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
• FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
• Blast2go: rop-family small gtpase 0.0
Putative Complete
uagpf_v2_unigene12973 uagpf v2.0 758
• AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031270.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] ref|NP_001031271.1| P-loop containing nucleoside triphospha 0.0
• Blast2go: p-loop containing nucleoside triphosphate hydrolase-like protein 0.0
unknown
uagpf_v2_unigene13400 uagpf v2.0 644
• AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor chloroplastic-like 0.0
N-terminus
uagpf_v2_unigene13462 uagpf v2.0 1349
• AutoFact: Ras-related protein Rab-2-B n=15 Tax=Magnoliophyta RepID=RAB2B_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab-2-a 0.0
Complete
uagpf_v2_unigene13501 uagpf v2.0 491
• AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 5b 0.0
N-terminus
uagpf_v2_unigene13682 uagpf v2.0 491
• AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
• FL-Next: sp=Elongation factor 2; Beta vulgaris (Sugar beet). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Internal
uagpf_v2_unigene13754 uagpf v2.0 462
• AutoFact: GTPase [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein raba5d-like 0.0
C-terminus
uagpf_v2_unigene13995 uagpf v2.0 1667
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
Complete
uagpf_v2_unigene14024 uagpf v2.0 1632
• AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein sar1a 0.0
Complete
uagpf_v2_unigene14059 uagpf v2.0 405
• AutoFact: elongation factor EF-2 [Arabidopsis thaliana] gb|AAK32918.1|AF367331_1 At1g56070/T6H22_13 [Arabidopsis thaliana] gb|AAK96653.1| elongation factor EF-2 [Arabidopsis thaliana] gb|AAN31808.1| putative elongation factor [Arabidopsis thaliana] gb|AAN31864.1| p 0.0
• FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: elongation factor ef-2 0.0
Internal
uagpf_v2_unigene14101 uagpf v2.0 917
• AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab2 -family small gtpase 0.0
Complete
uagpf_v2_unigene14264 uagpf v2.0 621
• AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
C-terminus
uagpf_v2_unigene14361 uagpf v2.0 636
• AutoFact: Rop2, RHO family GTPase (Fragment) n=1 Tax=Selaginella moellendorffii RepID=D8T9D8_SELML 5.0e-09
unknown
uagpf_v2_unigene14438 uagpf v2.0 890
• AutoFact: GTP-binding protein-relatedlike protein n=2 Tax=Arabidopsis RepID=Q9SVA6_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: developmentally-regulated gtp-binding protein 1 0.0
C-terminus
uagpf_v2_unigene14470 uagpf v2.0 1053
• AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8SWR5_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp binding protein 0.0
Putative Complete
uagpf_v2_unigene14576 uagpf v2.0 659
• AutoFact: PREDICTED: similar to guanine nucleotide regulatory protein n=1 Tax=Vitis vinifera RepID=UPI0001985FCE 0.0
• Blast2go: ras-related protein raba5a-like 0.0
unknown
uagpf_v2_unigene14829 uagpf v2.0 332
• AutoFact: Elongation factor Tu n=1 Tax=Ricinus communis RepID=B9SFP0_RICCO 0.0
• Blast2go: mitochondrial elongation factor tu 0.0
unknown
uagpf_v2_unigene14970 uagpf v2.0 538
• AutoFact: Caprin-1_C multi-domain protein 6.0e-09
• Blast2go: zinc finger protein 1.05389e-34
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain