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Assembly Name: uagpf v2.0

Name: Small GTPase superfamily, Rab type

Term: IPR003579  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36538 uagpf v2.0 323
AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
Blast2go: gtp binding protein 0.0
Putative coding
uagpf_v2_unigene37103 uagpf v2.0 690
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
N-terminus
uagpf_v2_unigene37524 uagpf v2.0 435
AutoFact: Ras-related protein RABA2a [Arabidopsis thaliana] sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName: Full=Ras-related protein Rab11C; Short=AtRab11C; Flags: Precursor gb|AAB60720.1| Strong similarity to A. thaliana 0.0
Blast2go: rab11 -family small gtpase 0.0
Putative coding
uagpf_v2_unigene39035 uagpf v2.0 310
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
Blast2go: rab gtpase-like protein a4d 0.0
unknown
uagpf_v2_unigene39609 uagpf v2.0 444
AutoFact: GTPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba5d-like 0.0
N-terminus
uagpf_v2_unigene42655 uagpf v2.0 336
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
C-terminus
uagpf_v2_unigene42745 uagpf v2.0 308
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
Blast2go: rab11 -family small gtpase 0.0
unknown
uagpf_v2_unigene43916 uagpf v2.0 310
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 6.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab7 -family small gtpase 2.8026e-45
N-terminus
uagpf_v2_unigene46858 uagpf v2.0 266
AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
Blast2go: ras-related protein rab7 0.0
unknown
uagpf_v2_unigene49161 uagpf v2.0 447
AutoFact: GTPase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba5d-like 0.0
N-terminus
uagpf_v2_unigene49280 uagpf v2.0 201
AutoFact: RecName: Full=Ras-related protein Rab2BV emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab11 -family small gtpase 0.0
Internal
uagpf_v2_unigene49628 uagpf v2.0 610
AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 0.0
Blast2go: rab family gtpase 0.0
unknown
uagpf_v2_unigene50416 uagpf v2.0 513
AutoFact: RecName: Full=Ras-related protein Rab2BV emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab11 -family small gtpase 0.0
N-terminus
uagpf_v2_unigene51076 uagpf v2.0 562
AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 0.0
FL-Next: tr=Rab1; Pinus pinaster (Maritime pine). 0.0
Blast2go: rab family gtpase 0.0
C-terminus
uagpf_v2_unigene51217 uagpf v2.0 441
AutoFact: Protein phosphatase 2C n=2 Tax=Physcomitrella patens RepID=B1B5N7_9BRYO 0.0
Blast2go: protein phosphatase 2c 0.0
Coding
uagpf_v2_unigene51264 uagpf v2.0 426
AutoFact: Ras-related protein Rab11A n=5 Tax=Papilionoideae RepID=RB11A_LOTJA 0.0
Blast2go: ras-related protein rab11a 0.0
unknown
uagpf_v2_unigene51429 uagpf v2.0 441
AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 0.0
N-terminus
uagpf_v2_unigene51436 uagpf v2.0 353
AutoFact: Ras-related protein RABE1c n=6 Tax=rosids RepID=RAE1C_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein ara-3 0.0
C-terminus
uagpf_v2_unigene52415 uagpf v2.0 386
AutoFact: putative GTP-binding protein [Gossypium hirsutum] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 1.52349e-22
Putative N-terminus
uagpf_v2_unigene52509 uagpf v2.0 337
AutoFact: GTP binding protein [Cichorium intybus x Cichorium endivia] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp binding protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain