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Assembly Name: uagpf v2.0

Name: Small GTPase superfamily

Term: IPR001806  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19022 uagpf v2.0 1282
AutoFact: Ras-related protein RIC1 n=7 Tax=commelinids RepID=RIC1_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
uagpf_v2_unigene19323 uagpf v2.0 1387
AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rab-18 0.0
Complete
uagpf_v2_unigene19408 uagpf v2.0 1366
AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab6 -family small gtpase 0.0
Complete
uagpf_v2_unigene19557 uagpf v2.0 1130
AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
N-terminus
uagpf_v2_unigene19782 uagpf v2.0 1511
AutoFact: Ras-related protein RABH1e n=4 Tax=Brassicaceae RepID=RAH1E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein rabh1e-like 0.0
Complete
uagpf_v2_unigene25647 uagpf v2.0 229
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RPN0_SELML 8.0e-33
Blast2go: ras-related protein rab-18 1.01631e-40
unknown
uagpf_v2_unigene25831 uagpf v2.0 433
AutoFact: GTP-binding protein era, putative n=1 Tax=Ricinus communis RepID=B9S6C9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase era-like 0.0
C-terminus
uagpf_v2_unigene25850 uagpf v2.0 359
AutoFact: Probable protein phosphatase 2C 59 n=5 Tax=Magnoliophyta RepID=P2C59_ARATH 0.0
Blast2go: protein phosphatase 2c 0.0
unknown
uagpf_v2_unigene26306 uagpf v2.0 309
AutoFact: XPA-binding protein 1 [Arabidopsis thaliana] ref|NP_974586.1| XPA-binding protein 1 [Arabidopsis thaliana] gb|AAL31895.1|AF419563_1 AT4g21800/F17L22_260 [Arabidopsis thaliana] gb|AAN28818.1| At4g21800/F17L22_260 [Arabidopsis thaliana] gb|AEE84504.1| XPA-b 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: xpa-binding protein 1 0.0
Internal
uagpf_v2_unigene26596 uagpf v2.0 408
AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
Blast2go: small gtpase 0.0
unknown
uagpf_v2_unigene26696 uagpf v2.0 378
AutoFact: small GTP-binding protein [Mesembryanthemum crystallinum] 0.0
Blast2go: rab family gtpase 0.0
Putative coding
uagpf_v2_unigene27109 uagpf v2.0 308
AutoFact: Ras-related protein Rab7 n=11 Tax=core eudicotyledons RepID=RAB7_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab gtpase homolog g3a 0.0
C-terminus
uagpf_v2_unigene27555 uagpf v2.0 306
AutoFact: Protein phosphatase 2C n=2 Tax=Physcomitrella patens RepID=B1B5N7_9BRYO 0.0
Blast2go: protein phosphatase 2c 0.0
Coding
uagpf_v2_unigene28877 uagpf v2.0 607
AutoFact: Ras-related protein RABA4d n=2 Tax=Arabidopsis RepID=RAA4D_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab11 -family small gtpase 0.0
C-terminus
uagpf_v2_unigene31499 uagpf v2.0 309
AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
Blast2go: small gtpase 0.0
unknown
uagpf_v2_unigene31749 uagpf v2.0 397
AutoFact: WS0423.C21_M11 SS-NE-27 Picea sitchensis cDNA clone WS0423_M11 3', mRNA sequence. 0.0
Blast2go: thioredoxin family protein 0.0
unknown
uagpf_v2_unigene32495 uagpf v2.0 313
AutoFact: cullin 3B [Arabidopsis thaliana] sp|Q9C9L0.1|CUL3B_ARATH RecName: Full=Cullin-3B; Short=AtCUL3b gb|AAG52544.1|AC013289_11 putative cullin; 66460-68733 [Arabidopsis thaliana] gb|AEE34961.1| cullin 3B [Arabidopsis thaliana] 3.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene32955 uagpf v2.0 206
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
Blast2go: rop-family small gtpase 0.0
unknown
uagpf_v2_unigene33999 uagpf v2.0 490
AutoFact: Rac-like GTP-binding protein 7 n=5 Tax=Embryophyta RepID=RAC7_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rop-family small gtpase 0.0
Putative N-terminus
uagpf_v2_unigene35797 uagpf v2.0 482
AutoFact: Rab family GTPase n=1 Tax=Selaginella moellendorffii RepID=D8RRT7_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab7 -family small gtpase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain