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Assembly Name: uagpf v2.0

Name: SNF2-related

Term: IPR000330  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41507 uagpf v2.0 342
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene42577 uagpf v2.0 216
AutoFact: [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family 2.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
uagpf_v2_unigene43390 uagpf v2.0 265
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase ino80-like 0.0
Internal
uagpf_v2_unigene45439 uagpf v2.0 381
AutoFact: SNF2 family DNA-dependent ATPase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S384_PHYPA 4.0e-12
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 7.31578e-12
Internal
uagpf_v2_unigene45606 uagpf v2.0 229
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene46513 uagpf v2.0 292
AutoFact: chromatin remodeling 5 [Arabidopsis thaliana] gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana] 6.0e-22
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 4.56641e-31
Internal
uagpf_v2_unigene47903 uagpf v2.0 272
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
uagpf_v2_unigene48329 uagpf v2.0 331
AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Chromodomain helicase DNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene48380 uagpf v2.0 387
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene48427 uagpf v2.0 279
AutoFact: Unassigned protein
Coding
uagpf_v2_unigene48429 uagpf v2.0 265
AutoFact: protein chromatin remodeling 24 [Arabidopsis thaliana] gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana] gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana] gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana] 4.0e-19
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna excision repair protein ercc-6-like 6.99736e-23
Internal
uagpf_v2_unigene49963 uagpf v2.0 537
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9H8P5_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair and recombination protein 0.0
C-terminus
uagpf_v2_unigene52092 uagpf v2.0 622
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=ATP-dependent DNA helicase DDM1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Putative N-terminus
uagpf_v2_unigene52392 uagpf v2.0 499
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene54982 uagpf v2.0 432
AutoFact: Caldesmon multi-domain protein 7.0e-18
Blast2go: auxilin-related protein 2-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain