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Assembly Name: uagpf v2.0

Name: Signal recognition particle, SRP54 subunit, GTPase

Term: IPR000897  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene38669 uagpf v2.0 356
AutoFact: Transcription factor AP2-EREBP n=1 Tax=Lotus japonicus RepID=B3IX32_LOTJA 7.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive transcription factor 1a 0.0
C-terminus
uagpf_v2_unigene39437 uagpf v2.0 374
AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal recognition particle 54 kda protein 3 0.0
Internal
uagpf_v2_unigene39777 uagpf v2.0 423
AutoFact: signal recognition particle subunit [Arabidopsis thaliana] sp|P37107.1|SR54C_ARATH RecName: Full=Signal recognition particle 54 kDa protein, chloroplastic; Short=54 chloroplast protein; Short=54CP; Short=SRP54; AltName: Full=FFC; Flags: Precursor emb|CAA7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal recognition particle 54 kda chloroplastic-like 0.0
Internal
uagpf_v2_unigene41507 uagpf v2.0 342
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene42124 uagpf v2.0 347
AutoFact: phosphoinositide 4-kinase gamma 7 [Arabidopsis thaliana] gb|AAL06989.1| At2g03890/T18C20.9 [Arabidopsis thaliana] gb|AAD24822.2| expressed protein [Arabidopsis thaliana] gb|AAO11612.1| At2g03890/T18C20.9 [Arabidopsis thaliana] gb|AEC05763.1| phosphoinosit 2.0e-27
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol 3-and 4-kinase family protein 1.5643e-35
Internal
uagpf_v2_unigene44017 uagpf v2.0 243
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: ran-binding protein 0.0
Internal
uagpf_v2_unigene44800 uagpf v2.0 221
AutoFact: Cucumisin, putative n=1 Tax=Ricinus communis RepID=B9R9K9_RICCO 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.0844e-27
Internal
uagpf_v2_unigene45180 uagpf v2.0 243
AutoFact: Signal recognition particle 54 kDa protein 2 n=11 Tax=Magnoliophyta RepID=SR542_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: signal recognition particle 54 kda protein 3 0.0
Putative C-terminus
uagpf_v2_unigene46244 uagpf v2.0 212
AutoFact: Inositol or phosphatidylinositol kinase, putative n=1 Tax=Ricinus communis RepID=B9RLG3_RICCO 0.0
Blast2go: probable phosphatidylinositol 4-kinase type 2-beta at1g26270-like 0.0
Coding
uagpf_v2_unigene46292 uagpf v2.0 373
AutoFact: Ethylene response factor 2.2 n=1 Tax=Bupleurum kaoi RepID=E8ZB56_9APIA 1.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.9758e-10
Putative C-terminus
uagpf_v2_unigene47761 uagpf v2.0 319
AutoFact: Xylem serine proteinase 1, putative n=1 Tax=Ricinus communis RepID=B9SHW1_RICCO 0.0
FL-Next: tr=Subtilisin-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: subtilisin-like protease-like 0.0
Internal
uagpf_v2_unigene50559 uagpf v2.0 535
AutoFact: Inositol or phosphatidylinositol kinase, putative n=1 Tax=Ricinus communis RepID=B9RLG3_RICCO 1.0e-16
FL-Next: sp=Probable phosphatidylinositol 4-kinase type 2-beta At1g26270; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phosphatidylinositol 4-kinase type 2-beta 2.43254e-19
N-terminus
uagpf_v2_unigene53292 uagpf v2.0 356
AutoFact: Ethylene-responsive element binding factor-like protein (Fragment) n=3 Tax=Picea sitchensis RepID=E0ZDA4_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ethylene-responsive element binding factor-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain