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Assembly Name: uagpf v2.0

Name: Transcription factor GRAS

Term: IPR005202  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1989 uagpf v2.0 883
AutoFact: SCARECROW-like protein 1 n=1 Tax=Pinus radiata RepID=A3E2G2_PINRA 0.0
FL-Next: tr=SCARECROW-like protein 1; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: gras family transcription factor 0.0
C-terminus
uagpf_v2_unigene2920 uagpf v2.0 578
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: sp=Scarecrow-like protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chitin-inducible gibberellin-responsive protein 0.0
C-terminus
uagpf_v2_unigene3482 uagpf v2.0 477
AutoFact: DELLA protein n=3 Tax=Malus RepID=Q0HA72_MALDO 0.0
Blast2go: della protein 0.0
Putative coding
uagpf_v2_unigene3676 uagpf v2.0 1463
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
C-terminus
uagpf_v2_unigene3687 uagpf v2.0 926
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: della protein 0.0
Internal
uagpf_v2_unigene4290 uagpf v2.0 718
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 1-like 0.0
C-terminus
uagpf_v2_unigene5059 uagpf v2.0 1060
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9GPD0_POPTR 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Putative C-terminus
uagpf_v2_unigene5303 uagpf v2.0 967
AutoFact: GRAS family transcription factor containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5708 uagpf v2.0 894
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S6I2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: scarecrow-like protein 4-like 0.0
C-terminus
uagpf_v2_unigene7714 uagpf v2.0 531
AutoFact: GRAS family transcription factor n=1 Tax=Populus trichocarpa RepID=B9GPD0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: gras family transcription factor 0.0
Internal
uagpf_v2_unigene8152 uagpf v2.0 1215
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
Blast2go: scarecrow-like protein 1-like 0.0
unknown
uagpf_v2_unigene9687 uagpf v2.0 738
AutoFact: Chitin-inducible gibberellin-responsive protein, putative n=1 Tax=Ricinus communis RepID=B9S2N0_RICCO 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: scarecrow-like protein 1-like 0.0
Internal
uagpf_v2_unigene13049 uagpf v2.0 660
AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GTP1_POPTR 0.0
Blast2go: scarecrow-like protein 1-like 0.0
Putative coding
uagpf_v2_unigene15803 uagpf v2.0 691
AutoFact: GRAS family transcription factor n=2 Tax=Populus trichocarpa RepID=B9GTP1_POPTR 0.0
Blast2go: scarecrow-like protein 1-like 0.0
unknown
uagpf_v2_unigene19584 uagpf v2.0 968
AutoFact: DELLA domain GRAS family transcription factor rga-like protein n=2 Tax=Populus trichocarpa RepID=B9GV61_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: della protein 0.0
C-terminus
uagpf_v2_unigene25783 uagpf v2.0 592
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene26713 uagpf v2.0 291
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.09305e-40
Internal
uagpf_v2_unigene27251 uagpf v2.0 439
AutoFact: SCL domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJB4_MALDO 0.0
Blast2go: nodulation signaling pathway 1 protein 0.0
Coding
uagpf_v2_unigene27306 uagpf v2.0 353
AutoFact: pfam03514, GRAS, GRAS family transcription factor 0.0
FL-Next: tr=SCARECROW; Pinus sylvestris (Scots pine). 0.0
Blast2go: gras family transcription factor 0.0
Internal
uagpf_v2_unigene27342 uagpf v2.0 261
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain