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Assembly Name: uagpf v2.0

Name: Bromodomain

Term: IPR001487  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene20446 uagpf v2.0 867
AutoFact: calmodulin-binding protein [Arabidopsis thaliana] gb|AAF28348.1| calmodulin-binding protein [Arabidopsis thaliana] 0.0
Blast2go: aaa family atpase cdc48 subfamily 0.0
unknown
uagpf_v2_unigene27706 uagpf v2.0 379
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9SV90_RICCO 4.0e-38
Blast2go: bromodomain-containing protein 2.4266e-39
Coding
uagpf_v2_unigene28131 uagpf v2.0 417
AutoFact: Bromodomain protein 103-like n=3 Tax=Oryza sativa RepID=Q69IM3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: bromodomain protein with a aaa atpase domain 0.0
Internal
uagpf_v2_unigene28241 uagpf v2.0 378
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene31071 uagpf v2.0 262
AutoFact: Global transcription factor group (Fragment) n=1 Tax=Populus trichocarpa RepID=B9I3M5_POPTR 2.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group e4 4.45931e-17
Internal
uagpf_v2_unigene31813 uagpf v2.0 371
AutoFact: [BK] COG5076 Transcription factor involved in chromatin remodeling, contains bromodomain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor gte8-like 0.0
Internal
uagpf_v2_unigene32136 uagpf v2.0 648
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene34077 uagpf v2.0 395
AutoFact: Bromodomain n=1 Tax=Medicago truncatula RepID=Q1SKV9_MEDTR 1.0e-23
FL-Next: tr=Bromodomain; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: dna-binding bromodomain-containing protein 7.15752e-29
Internal
uagpf_v2_unigene35539 uagpf v2.0 244
AutoFact: transcription initiation factor TFIID subunit 1-A [Arabidopsis thaliana] sp|Q8LRK9.1|TAF1A_ARATH RecName: Full=Transcription initiation factor TFIID subunit 1-A; Short=AtTAF1a; AltName: Full=TAFII250-A gb|AAM34782.1|AF510669_1 HAF1 [Arabidopsis thaliana] 3.0e-12
Blast2go: transcription initiation factor subunit taf1 8.4424e-16
unknown
uagpf_v2_unigene36702 uagpf v2.0 482
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
Blast2go: histone acetyltransferase 0.0
unknown
uagpf_v2_unigene36968 uagpf v2.0 376
AutoFact: chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] dbj|BAF34944.1| chromatin remodeling factor DDM1a [Oryza sativa Japonica Group] gb|EEE69802.1| hypothetical protein OsJ_29535 [Oryza sativa Japonica Group] 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene37165 uagpf v2.0 406
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene37202 uagpf v2.0 448
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Internal
uagpf_v2_unigene37264 uagpf v2.0 448
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9SV90_RICCO 4.0e-38
FL-Next: tr=Bromodomain-containing protein; Ricinus communis (Castor bean). 0.0
Blast2go: bromodomain-containing protein 2.4266e-39
C-terminus
uagpf_v2_unigene37289 uagpf v2.0 628
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
Blast2go: global transcription factor group e4 0.0
unknown
uagpf_v2_unigene37868 uagpf v2.0 576
AutoFact: Histone acetyltransferase gcn5, putative n=1 Tax=Ricinus communis RepID=B9S4R6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
Internal
uagpf_v2_unigene39960 uagpf v2.0 173
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9T479_RICCO 2.0e-14
Blast2go: bromodomain protein 1.29187e-15
unknown
uagpf_v2_unigene40017 uagpf v2.0 286
AutoFact: Bromodomain-containing protein n=1 Tax=Ricinus communis RepID=B9SV90_RICCO 4.0e-38
Blast2go: bromodomain-containing protein 2.4266e-39
Coding
uagpf_v2_unigene40789 uagpf v2.0 331
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGL2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: global transcription factor group e4 0.0
Putative C-terminus
uagpf_v2_unigene41507 uagpf v2.0 342
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain