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Assembly Name: uagpf v2.0

Name: Nuclear transport factor 2

Term: IPR002075  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19605 uagpf v2.0 619
AutoFact: Tumor suppressor candidate, putative n=1 Tax=Ricinus communis RepID=B9RXQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tumor suppressor 0.0
N-terminus
uagpf_v2_unigene19727 uagpf v2.0 647
AutoFact: Tumor suppressor candidate, putative n=1 Tax=Ricinus communis RepID=B9RXQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tumor suppressor 0.0
C-terminus
uagpf_v2_unigene28319 uagpf v2.0 355
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Internal
uagpf_v2_unigene28622 uagpf v2.0 505
AutoFact: Ninja-family protein AFP3 n=1 Tax=Arabidopsis thaliana RepID=AFP3_ARATH 3.0e-09
Blast2go: ninja-family protein afp3 3.08565e-15
Putative coding
uagpf_v2_unigene33335 uagpf v2.0 311
AutoFact: putative Ras-GTPase-activating protein binding protein 1 [Oryza sativa Japonica Group] dbj|BAG91794.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
Blast2go: rna binding 0.0
unknown
uagpf_v2_unigene33715 uagpf v2.0 284
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 1.0e-19
Blast2go: ras gtpase-activating protein-binding protein 5.99084e-26
unknown
uagpf_v2_unigene38857 uagpf v2.0 228
AutoFact: Metal transporter Nramp6 n=2 Tax=Arabidopsis thaliana RepID=NRAM6_ARATH 0.0
FL-Next: sp=Metal transporter Nramp6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: metal ion transporter 0.0
Internal
uagpf_v2_unigene50131 uagpf v2.0 757
AutoFact: NTF2 domain containing protein 3.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low quality protein: g3bp-like 0.0
N-terminus
uagpf_v2_unigene51040 uagpf v2.0 615
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 0.0
Blast2go: ras-gtpase-activating protein-binding 0.0
Coding
uagpf_v2_unigene51832 uagpf v2.0 251
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100 0.0
Blast2go: rna binding 0.0
unknown
uagpf_v2_unigene52035 uagpf v2.0 301
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB10647.1| unnamed protein product [Arabidopsis thaliana] gb|AAL32982.1| AT5g60980/MSL3_100 [Arabidopsis thaliana] gb|AAO23575.1| At5g60980/MSL3_100 0.0
Blast2go: rna binding 0.0
unknown
uagpf_v2_unigene52111 uagpf v2.0 580
AutoFact: Tumor suppressor candidate, putative n=1 Tax=Ricinus communis RepID=B9RXQ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tumor suppressor 0.0
N-terminus
uagpf_v2_unigene52162 uagpf v2.0 434
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 0.0
Blast2go: ras-gtpase-activating protein-binding 0.0
Putative coding
uagpf_v2_unigene53005 uagpf v2.0 473
AutoFact: Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001030794.1| Ninja-family protein AFP3 [Arabidopsis thaliana] ref|NP_001078222.1| Ninja-family protein AFP3 [Arabidopsis thaliana] sp|Q94F39.1|AFP3_ARATH RecName: Full=Ninja-family protein AFP3; AltN 3.0e-21
Blast2go: ninja-family protein afp3 2.3771e-27
Coding
uagpf_v2_unigene54135 uagpf v2.0 299
AutoFact: nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] dbj|BAB09056.1| unnamed protein product [Arabidopsis thaliana] gb|AAL86001.1| unknown protein [Arabidopsis thaliana] gb|AAM45065.1| unknown protein [Arab 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras gtpase-activating protein-binding protein 5.99084e-26
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain