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Assembly Name: uagpf v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40048 uagpf v2.0 540
AutoFact: nuclear transcription factor Y subunit B-3 [Arabidopsis thaliana] sp|O23310.1|NFYB3_ARATH RecName: Full=Nuclear transcription factor Y subunit B-3; Short=AtNF-YB-3; AltName: Full=Transcriptional activator HAP3C emb|CAB10233.1| CCAAT-binding transcription 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit b-3 0.0
Putative N-terminus
uagpf_v2_unigene40715 uagpf v2.0 445
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
C-terminus
uagpf_v2_unigene41488 uagpf v2.0 206
AutoFact: Histone H2B.10 n=5 Tax=Arabidopsis RepID=H2B10_ARATH 9.99967e-42
Blast2go: histone h2b like protein 0.0
Coding
uagpf_v2_unigene41695 uagpf v2.0 313
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.99997e-41
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene41924 uagpf v2.0 192
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene42794 uagpf v2.0 256
AutoFact: Histone H2B.5 n=3 Tax=Magnoliophyta RepID=H2B5_WHEAT 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: h2b5_wheat ame: full=histone ame: full=wch2b-6 9.25196e-11
N-terminus
uagpf_v2_unigene43727 uagpf v2.0 149
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U534_PHYPA 2.0e-24
Blast2go: cenh3 1.87561e-29
unknown
uagpf_v2_unigene43884 uagpf v2.0 171
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 6.3846e-13
Internal
uagpf_v2_unigene45419 uagpf v2.0 413
AutoFact: Ccaat-binding transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RHZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 3.49541e-11
Internal
uagpf_v2_unigene46440 uagpf v2.0 411
AutoFact: Nuclear transcription factor Y subunit C-2 n=2 Tax=Arabidopsis RepID=NFYC2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear transcription factor y subunit c-2 0.0
N-terminus
uagpf_v2_unigene48452 uagpf v2.0 329
AutoFact: TATA binding protein associated factor n=1 Tax=Solanum tuberosum RepID=Q3LHL0_SOLTU 7.0e-37
Blast2go: transcription initiation factor tfiid subunit a 4.14924e-42
Coding
uagpf_v2_unigene48797 uagpf v2.0 141
AutoFact: CCAAT-box binding factor HAP5 homolog [Daucus carota] 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
unknown
uagpf_v2_unigene49095 uagpf v2.0 121
AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
Blast2go: histone h2b 0.0
unknown
uagpf_v2_unigene49600 uagpf v2.0 804
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.00001e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a variant 1 0.0
Putative Complete
uagpf_v2_unigene49610 uagpf v2.0 516
AutoFact: CCAAT-box binding factor HAP5 homolog [Daucus carota] 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
unknown
uagpf_v2_unigene51010 uagpf v2.0 813
AutoFact: Histone H3 n=3 Tax=Eukaryota RepID=B6SJQ5_MAIZE 0.0
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h3 0.0
Complete
uagpf_v2_unigene51023 uagpf v2.0 568
AutoFact: Unassigned protein
Blast2go: dek domain-containing chromatin associated protein 0.0
Coding
uagpf_v2_unigene51199 uagpf v2.0 422
AutoFact: Isoform 2 of Probable carboxylesterase 11 n=1 Tax=Arabidopsis thaliana RepID=Q9LK21-2 0.0
Blast2go: probable carboxylesterase 11-like 0.0
unknown
uagpf_v2_unigene52054 uagpf v2.0 510
AutoFact: CCAAT-box binding factor HAP5 homolog [Daucus carota] 0.0
FL-Next: tr=HAP5B; Picea wilsonii. 0.0
Blast2go: nuclear transcription factor y subunit c-9 0.0
C-terminus
uagpf_v2_unigene52074 uagpf v2.0 509
AutoFact: nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] ref|NP_973617.1| nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] ref|NP_001031500.1| nuclear transcription factor Y subunit B-8 [Arabidopsis thaliana] sp|Q8VYK4.1|NFYB8_AR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain