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Assembly Name: uagpf v2.0

Name: Histone-fold

Term: IPR009072  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene17587 uagpf v2.0 794
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NTX3_PICSI 4.06377e-44
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 0.0
Complete
uagpf_v2_unigene17847 uagpf v2.0 824
AutoFact: transcription initiation factor TFIID subunit D7 [Arabidopsis thaliana] gb|AAD25788.1|AC006577_24 Similar to gb|U21858 transcription initiation factor TFIID 31KD subunit (TAFII32) from Homo sapiens [Arabidopsis thaliana] gb|AAF65406.1|AF238327_1 putative 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor tfiid subunit 0.0
C-terminus
uagpf_v2_unigene17851 uagpf v2.0 733
AutoFact: histone H4 [Hyacinthus orientalis] 1.0e-35
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 1.12104e-44
Putative Complete
uagpf_v2_unigene18036 uagpf v2.0 718
AutoFact: nuclear factor Y, subunit C11 [Arabidopsis thaliana] gb|AAL58929.1|AF462841_1 At3g12480/MQC3.32 [Arabidopsis thaliana] dbj|BAB03155.1| unnamed protein product [Arabidopsis thaliana] gb|AAN28786.1| At3g12480/MQC3.32 [Arabidopsis thaliana] gb|AEE75200.1| nu 4.00001e-41
Blast2go: protein 0.0
unknown
uagpf_v2_unigene18152 uagpf v2.0 916
AutoFact: Histone H2A n=2 Tax=Physcomitrella patens subsp. patens RepID=A9S412_PHYPA 0.0
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone 2 0.0
Complete
uagpf_v2_unigene18341 uagpf v2.0 568
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.93918e-30
Complete
uagpf_v2_unigene18484 uagpf v2.0 799
AutoFact: Histone H2A n=15 Tax=Embryophyta RepID=A5AKG7_VITVI 4.00001e-41
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a variant 1 0.0
Complete
uagpf_v2_unigene18485 uagpf v2.0 661
AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI 4.99997e-41
FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18707 uagpf v2.0 792
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 5.0e-25
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 2.5647e-30
C-terminus
uagpf_v2_unigene19062 uagpf v2.0 956
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
uagpf_v2_unigene19120 uagpf v2.0 822
AutoFact: putative bHLH transcription factor [Arabidopsis thaliana] 9.94922e-44
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transcription factor bhlh63-like 0.0
C-terminus
uagpf_v2_unigene19301 uagpf v2.0 778
AutoFact: nuclear transcription factor Y subunit C-1 [Arabidopsis thaliana] sp|Q9SMP0.1|NFYC1_ARATH RecName: Full=Nuclear transcription factor Y subunit C-1; Short=AtNF-YC-1; AltName: Full=Transcriptional activator HAP5A emb|CAB62348.1| transcription factor Hap5a [ 9.0e-38
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene19350 uagpf v2.0 917
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 3.0e-35
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.55544e-43
Complete
uagpf_v2_unigene19540 uagpf v2.0 588
AutoFact: repressor protein [Glycine max] gb|ACU13895.1| unknown [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein dr1-like protein 0.0
Putative Complete
uagpf_v2_unigene19646 uagpf v2.0 706
AutoFact: Histone H4 n=7 Tax=Neoptera RepID=E0VXR9_PEDHC 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
uagpf_v2_unigene19746 uagpf v2.0 940
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 1.0e-24
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 8.9211e-30
Complete
uagpf_v2_unigene19891 uagpf v2.0 672
AutoFact: Histone H3 n=2 Tax=Pediculus humanus corporis RepID=E0V960_PEDHC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h3 0.0
C-terminus
uagpf_v2_unigene19946 uagpf v2.0 904
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 7.0e-34
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a-like protein 6.44597e-44
Complete
uagpf_v2_unigene20085 uagpf v2.0 960
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 2.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.69116e-31
C-terminus
uagpf_v2_unigene20119 uagpf v2.0 801
AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA 5.0e-36
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 4.2039e-45
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain