Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Mitochodrial transcription termination factor-related

Term: IPR003690  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene27825 uagpf v2.0 673
AutoFact: DUF810 domain containing protein 2.0e-22
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene27869 uagpf v2.0 255
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] gb|AAC79107.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77784.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82257.1| Mitochondrial transcription terminat 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
unknown
uagpf_v2_unigene29171 uagpf v2.0 281
AutoFact: mitochondrial transcription termination factor-like [Oryza sativa Japonica Group] 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor-like 0.0
Internal
uagpf_v2_unigene29350 uagpf v2.0 720
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene29714 uagpf v2.0 428
AutoFact: pfam00808, CBFD_NFYB_HMF, Histone-like transcription factor (CBF/NF-Y) and archaeal histone 2.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccaat-box binding factor hap3 1.22841e-28
Internal
uagpf_v2_unigene30171 uagpf v2.0 412
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAH20130.1| AT5G46840 [Arabidopsis thaliana] gb|AED95433.1| RNA recognition motif-containing protein [Arabidopsis thaliana] 0.0
Blast2go: rna recognition motif-containing protein 0.0
unknown
uagpf_v2_unigene30232 uagpf v2.0 499
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7TQ19_VITVI 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mterf domain-containing protein 2.12338e-16
Putative C-terminus
uagpf_v2_unigene30415 uagpf v2.0 378
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
uagpf_v2_unigene30417 uagpf v2.0 640
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.59698e-29
N-terminus
uagpf_v2_unigene30656 uagpf v2.0 393
AutoFact: WS00727.B21_N20 WS-PS-N-A-8 Picea glauca cDNA clone WS00727_N20 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene32905 uagpf v2.0 359
AutoFact: WS00727.B21_N20 WS-PS-N-A-8 Picea glauca cDNA clone WS00727_N20 3, mRNA sequence. 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene35973 uagpf v2.0 441
AutoFact: mTERF domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene36389 uagpf v2.0 461
AutoFact: DUF810 domain containing protein 0.0
Blast2go: uncharacterized protein loc100248009 0.0
unknown
uagpf_v2_unigene36392 uagpf v2.0 489
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 9.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
N-terminus
uagpf_v2_unigene36485 uagpf v2.0 738
AutoFact: protoporphyrinogen IX oxidase [Glycine max] 0.0
Blast2go: mitochondrial protoporphyrinogen oxidase 0.0
Putative coding
uagpf_v2_unigene36845 uagpf v2.0 786
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: sp=Translation initiation factor IF-2, chloroplastic; Rhodomonas salina (Cryptomonas salina). Plastid; Chloroplast. 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
Internal
uagpf_v2_unigene37371 uagpf v2.0 650
AutoFact: mTERF domain containing protein 3.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Putative C-terminus
uagpf_v2_unigene37817 uagpf v2.0 318
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 7.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.12166e-28
Internal
uagpf_v2_unigene38054 uagpf v2.0 301
AutoFact: mTERF domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.81113e-36
Putative C-terminus
uagpf_v2_unigene39720 uagpf v2.0 368
AutoFact: mTERF domain containing protein 4.0e-14
Blast2go: protein 0.0
Putative coding

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain