Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Mitochodrial transcription termination factor-related

Term: IPR003690  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13299 uagpf v2.0 1366
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
uagpf_v2_unigene13501 uagpf v2.0 491
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
N-terminus
uagpf_v2_unigene13704 uagpf v2.0 852
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 8.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
uagpf_v2_unigene13954 uagpf v2.0 877
AutoFact: Mitochondrial transcription termination factor family protein n=2 Tax=Arabidopsis RepID=O64531_ARATH 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
uagpf_v2_unigene14498 uagpf v2.0 699
AutoFact: Leafy cotyledon 1 n=2 Tax=Pinaceae RepID=E3P6R9_PSEMZ 0.0
FL-Next: tr=CCAAT-box binding factor HAP3-like protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: ccaat-box binding factor hap3-like protein 0.0
C-terminus
uagpf_v2_unigene14528 uagpf v2.0 443
AutoFact: Leafy cotyledon 1 n=2 Tax=Pinaceae RepID=E3P6R9_PSEMZ 0.0
FL-Next: tr=Leafy cotyledon 1; Pseudotsuga menziesii (Douglas-fir) (Abies menziesii). 0.0
Blast2go: ccaat-box binding factor hap3-like protein 0.0
N-terminus
uagpf_v2_unigene14740 uagpf v2.0 727
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100248009 0.0
Complete
uagpf_v2_unigene15196 uagpf v2.0 669
AutoFact: WS00727.B21_N20 WS-PS-N-A-8 Picea glauca cDNA clone WS00727_N20 3, mRNA sequence. 0.0
FL-Next: tr=Uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene15613 uagpf v2.0 1064
AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TK03_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5b 0.0
C-terminus
uagpf_v2_unigene15769 uagpf v2.0 528
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.41357e-28
N-terminus
uagpf_v2_unigene15939 uagpf v2.0 610
AutoFact: Leafy cotyledon 1 n=2 Tax=Pinaceae RepID=E3P6R9_PSEMZ 0.0
FL-Next: tr=CCAAT-box binding factor HAP3-like protein; Pinus sylvestris (Scots pine). 0.0
Blast2go: ccaat-box binding factor hap3-like protein 0.0
N-terminus
uagpf_v2_unigene16214 uagpf v2.0 387
AutoFact: mTERF domain containing protein 6.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100268158 0.0
N-terminus
uagpf_v2_unigene17921 uagpf v2.0 1297
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: sp=Glycine-rich RNA-binding protein GRP1A; Sinapis alba (White mustard) (Brassica hirta). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene18075 uagpf v2.0 597
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene18709 uagpf v2.0 733
AutoFact: mTERF domain containing protein 1.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100818835 2.0132e-25
Putative C-terminus
uagpf_v2_unigene19436 uagpf v2.0 388
AutoFact: mTERF domain containing protein 4.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene19947 uagpf v2.0 666
AutoFact: mTERF domain containing protein 4.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene20008 uagpf v2.0 382
AutoFact: mitochondrial transcription termination factor-like [Oryza sativa Japonica Group] gb|EAZ24627.1| hypothetical protein OsJ_08392 [Oryza sativa Japonica Group] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
Internal
uagpf_v2_unigene20010 uagpf v2.0 711
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
uagpf_v2_unigene25121 uagpf v2.0 640
AutoFact: Mitochondrial transcription termination factor-like n=1 Tax=Oryza sativa Japonica Group RepID=Q6K7E2_ORYSJ 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 4.37445e-29
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain