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Assembly Name: uagpf v2.0

Name: Paired amphipathic helix

Term: IPR003822  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene5264 uagpf v2.0 437
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene5386 uagpf v2.0 758
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
Blast2go: atp binding 0.0
unknown
uagpf_v2_unigene6145 uagpf v2.0 1084
AutoFact: SIN3 component, histone deacetylase complex n=1 Tax=Populus trichocarpa RepID=B9HU88_POPTR 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sin3 histone deacetylase complex 3.22299e-44
Putative Complete
uagpf_v2_unigene6800 uagpf v2.0 572
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene6988 uagpf v2.0 557
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen activated protein kinase kinase kinase 0.0
Putative Complete
uagpf_v2_unigene8879 uagpf v2.0 447
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene9327 uagpf v2.0 273
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene16587 uagpf v2.0 813
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
Blast2go: wrky transcription factor 0.0
Coding
uagpf_v2_unigene17897 uagpf v2.0 948
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase sin3 component 0.0
Putative Complete
uagpf_v2_unigene19043 uagpf v2.0 330
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 1.0e-09
FL-Next: sp=Paired amphipathic helix protein Sin3-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase sin3 component 3.71016e-11
Putative N-terminus
uagpf_v2_unigene19258 uagpf v2.0 663
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene19297 uagpf v2.0 640
AutoFact: Putative histone deacetylase complex, SIN3 component (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T7L8_PHYPA 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase sin3 component 4.90987e-39
Putative Complete
uagpf_v2_unigene24967 uagpf v2.0 503
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene25398 uagpf v2.0 357
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
Blast2go: mitogen activated protein kinase kinase kinase 0.0
unknown
uagpf_v2_unigene28059 uagpf v2.0 364
AutoFact: transcriptional co-repressor -like [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
Internal
uagpf_v2_unigene28278 uagpf v2.0 419
AutoFact: WRKY domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJF7_MALDO 0.0
FL-Next: sp=Paired amphipathic helix protein Sin3-like 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: paired amphipathic helix protein sin3 0.0
Internal
uagpf_v2_unigene29093 uagpf v2.0 440
AutoFact: Os01g0109700 protein (Fragment) n=6 Tax=Oryza sativa RepID=Q0JRB9_ORYSJ 0.0
Blast2go: sin3 histone deacetylase complex 0.0
unknown
uagpf_v2_unigene30162 uagpf v2.0 391
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene30229 uagpf v2.0 344
AutoFact: Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] gb|AEC08531.1| Hydroxyacylglutathione hydrolase 2 [Arabidopsis thaliana] 0.0
Blast2go: glyoxalase ii 0.0
unknown
uagpf_v2_unigene30813 uagpf v2.0 322
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
FL-Next: sp=Probable WRKY transcription factor 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain