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Assembly Name: uagpf v2.0

Name: Glycoside hydrolase, family 28

Term: IPR000743  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene67 uagpf v2.0 376
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene2392 uagpf v2.0 1483
AutoFact: polygalacturonase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
uagpf_v2_unigene2632 uagpf v2.0 1530
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2712 uagpf v2.0 587
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RR75_RICCO 0.0
Blast2go: probable polygalacturonase-like 0.0
unknown
uagpf_v2_unigene3595 uagpf v2.0 403
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 0.0
Blast2go: probable polygalacturonase-like 0.0
unknown
uagpf_v2_unigene4546 uagpf v2.0 566
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
uagpf_v2_unigene5342 uagpf v2.0 889
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RR75_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Putative C-terminus
uagpf_v2_unigene6765 uagpf v2.0 841
AutoFact: protein kinase MSK-3-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase epsilon 0.0
N-terminus
uagpf_v2_unigene7637 uagpf v2.0 467
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene8981 uagpf v2.0 449
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9SSX2_RICCO 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 3.72013e-15
Putative N-terminus
uagpf_v2_unigene9881 uagpf v2.0 633
AutoFact: Polygalacturonase n=1 Tax=Cucumis melo RepID=O81245_CUCME 4.0e-08
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: endo-polygalacturonase 5.16914e-09
Putative C-terminus
uagpf_v2_unigene10076 uagpf v2.0 1385
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
Complete
uagpf_v2_unigene10208 uagpf v2.0 1546
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Putative C-terminus
uagpf_v2_unigene11131 uagpf v2.0 1899
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Complete
uagpf_v2_unigene11808 uagpf v2.0 1797
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene12086 uagpf v2.0 652
AutoFact: polygalacturonase 5 [Solanum lycopersicum] 3.0e-23
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Blast2go: polygalacturonase 1.21649e-26
Putative C-terminus
uagpf_v2_unigene12588 uagpf v2.0 539
AutoFact: protein kinase MSK-3-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase epsilon 0.0
N-terminus
uagpf_v2_unigene14645 uagpf v2.0 573
AutoFact: Polygalacturonase n=2 Tax=Arabidopsis thaliana RepID=F4I672_ARATH 1.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin lyase-like protein 2.03339e-22
Putative N-terminus
uagpf_v2_unigene14825 uagpf v2.0 866
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
C-terminus
uagpf_v2_unigene15288 uagpf v2.0 813
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RCG6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain