Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Zinc finger, RING-CH-type

Term: IPR011016  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene67 uagpf v2.0 376
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene914 uagpf v2.0 1524
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
Complete
uagpf_v2_unigene1205 uagpf v2.0 232
AutoFact: Ssm4 protein, putative n=1 Tax=Ricinus communis RepID=B9RYE5_RICCO 2.0e-30
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring u-box domain-containing protein 5.28428e-36
Internal
uagpf_v2_unigene1393 uagpf v2.0 539
AutoFact: Zinc finger (C3HC4-type RING finger)protein-like n=4 Tax=Poaceae RepID=Q67WE0_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb10g025050; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene2632 uagpf v2.0 1530
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2817 uagpf v2.0 671
AutoFact: 3-hydroxyisobutyrate dehydrogenase-like protein [Arabidopsis thaliana] 6.0e-33
FL-Next: sp=Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: 3-hydroxyisobutyrate dehydrogenase 1.51548e-40
C-terminus
uagpf_v2_unigene2998 uagpf v2.0 728
AutoFact: zinc finger (C3HC4 type RING finger) family protein [Musa acuminata] 0.0
FL-Next: tr=Zinc finger (C3HC4 type RING finger) family protein; Musa acuminata (Banana) (Musa cavendishii). 0.0
Blast2go: zinc finger (c3hc4-type ring finger) 0.0
Putative C-terminus
uagpf_v2_unigene4013 uagpf v2.0 567
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AEE86323.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.27423e-30
N-terminus
uagpf_v2_unigene4288 uagpf v2.0 855
AutoFact: Carbon catabolite repressor protein 4 homolog 5 n=2 Tax=Arabidopsis RepID=CCR4E_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carbon catabolite repressor protein 4-like 3 0.0
C-terminus
uagpf_v2_unigene5569 uagpf v2.0 828
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: ischemia reperfusion inducible protein 0.0
C-terminus
uagpf_v2_unigene6470 uagpf v2.0 574
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_849790.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_001117462.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AAF87887.1| 3.0e-09
unknown
uagpf_v2_unigene7416 uagpf v2.0 845
AutoFact: PREDICTED: similar to zinc finger (C3HC4-type RING finger) family protein n=1 Tax=Vitis vinifera RepID=UPI000198426A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding 0.0
N-terminus
uagpf_v2_unigene8131 uagpf v2.0 656
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene8430 uagpf v2.0 608
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SPH2_RICCO 0.0
Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene8612 uagpf v2.0 851
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] ref|NP_974396.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] emb|CAB61981.1| putative protein [Arabidopsis thaliana] dbj|BAE98651.1| hypothetical protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring fyve phd zinc finger-containing protein 0.0
C-terminus
uagpf_v2_unigene8841 uagpf v2.0 395
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Internal
uagpf_v2_unigene10155 uagpf v2.0 363
AutoFact: shaggy-like kinase alpha [Arabidopsis thaliana] 3.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycogen synthase kinase-3 2.74593e-34
Internal
uagpf_v2_unigene10413 uagpf v2.0 469
AutoFact: Endonuclease/exonuclease/phosphatase family protein-like n=2 Tax=Oryza sativa RepID=Q5ZE24_ORYSJ 4.00001e-40
FL-Next: sp=Carbon catabolite repressor protein 4 homolog 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 6.5861e-44
C-terminus
uagpf_v2_unigene11125 uagpf v2.0 662
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] dbj|BAB09677.1| unnamed protein product [Arabidopsis thaliana] gb|AAP21185.1| At5g05830 [Arabidopsis thaliana] dbj|BAE99517.1| hypothetical protein [Arabidopsis thaliana] gb|AED90930.1| R 1.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
C-terminus
uagpf_v2_unigene11229 uagpf v2.0 989
AutoFact: [K] COG1678 Putative transcriptional regulator 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional regulator 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain