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Assembly Name: uagpf v2.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30556 uagpf v2.0 422
AutoFact: Glycosyltransferase n=4 Tax=Andropogoneae RepID=Q50HU8_SACOF 0.0
FL-Next: sp=Probable glucuronosyltransferase Os06g0687900; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: glycosyltransferase 0.0
C-terminus
uagpf_v2_unigene30705 uagpf v2.0 360
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
uagpf_v2_unigene31204 uagpf v2.0 270
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
Blast2go: homeobox-leucine zipper protein hdg2 0.0
Coding
uagpf_v2_unigene31321 uagpf v2.0 595
AutoFact: Glycosyltransferase n=2 Tax=Solanum RepID=Q50HV0_SOLLC 0.0
FL-Next: sp=Probable glucuronosyltransferase Os06g0687900; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable beta- -xylosyltransferase irx14h-like 0.0
Internal
uagpf_v2_unigene32033 uagpf v2.0 446
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
Blast2go: beta chain 0.0
unknown
uagpf_v2_unigene32042 uagpf v2.0 826
AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
uagpf_v2_unigene34647 uagpf v2.0 268
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma tubulin 0.0
N-terminus
uagpf_v2_unigene35083 uagpf v2.0 317
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
Putative C-terminus
uagpf_v2_unigene35291 uagpf v2.0 297
AutoFact: DOF domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZIX8_MALDO 9.99995e-41
Blast2go: f-box family protein 2.8026e-45
unknown
uagpf_v2_unigene37286 uagpf v2.0 510
AutoFact: Alpha-tubulin (Fragment) n=1 Tax=Camellia sinensis RepID=Q646H4_CAMSI 1.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha- 4.0878e-25
C-terminus
uagpf_v2_unigene37408 uagpf v2.0 407
AutoFact: MORN domain containing protein 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38247 uagpf v2.0 264
AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeodomain protein 0.0
Internal
uagpf_v2_unigene38570 uagpf v2.0 409
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: tr=PUF-domain RNA-binding protein; Physcomitrella patens. 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38905 uagpf v2.0 356
AutoFact: Homeodomain protein HB2 n=1 Tax=Picea abies RepID=Q8S555_PICAB 0.0
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: tpa_inf: class iv hd-zip protein hdz44 0.0
C-terminus
uagpf_v2_unigene39392 uagpf v2.0 402
AutoFact: Predicted protein n=3 Tax=Physcomitrella patens subsp. patens RepID=A9SMX6_PHYPA 0.0
FL-Next: sp=Pumilio homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39764 uagpf v2.0 350
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
Blast2go: nucleic acid binding 0.0
unknown
uagpf_v2_unigene39793 uagpf v2.0 378
AutoFact: Homeobox-leucine zipper protein ROC7 n=5 Tax=Oryza RepID=ROC7_ORYSJ 1.0e-23
FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein anthocyaninless 2-like 2.13215e-29
Internal
uagpf_v2_unigene40496 uagpf v2.0 354
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
uagpf_v2_unigene40722 uagpf v2.0 327
AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
Blast2go: homeobox-leucine zipper protein hdg2 0.0
Putative coding
uagpf_v2_unigene40814 uagpf v2.0 352
AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain