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Assembly Name: uagpf v2.0

Name: Tubulin, conserved site

Term: IPR017975  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene19447 uagpf v2.0 794
AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
FL-Next: tr=Alpha tubulin 1; Pseudotsuga menziesii var. menziesii. 0.0
Blast2go: alpha tubulin 1 0.0
C-terminus
uagpf_v2_unigene19566 uagpf v2.0 2062
AutoFact: putative ribosomal-protein S6 kinase-like protein [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene19615 uagpf v2.0 634
AutoFact: Tubulin alpha-6 chain n=85 Tax=Eukaryota RepID=TBA6_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha tubulin 1 0.0
C-terminus
uagpf_v2_unigene19629 uagpf v2.0 724
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pumilio homolog 2-like 0.0
Complete
uagpf_v2_unigene19648 uagpf v2.0 1345
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
N-terminus
uagpf_v2_unigene19722 uagpf v2.0 269
AutoFact: Nucleic acid binding NABP [Medicago truncatula] 0.0
Blast2go: pumilio homolog 2-like 0.0
unknown
uagpf_v2_unigene19869 uagpf v2.0 1076
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta 0.0
N-terminus
uagpf_v2_unigene19933 uagpf v2.0 1079
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
N-terminus
uagpf_v2_unigene19977 uagpf v2.0 580
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-tubulin 2 0.0
N-terminus
uagpf_v2_unigene20108 uagpf v2.0 489
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
uagpf_v2_unigene20142 uagpf v2.0 1017
AutoFact: Tubulin beta-2/beta-3 chain n=340 Tax=Eukaryota RepID=TBB2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta chain 0.0
Putative C-terminus
uagpf_v2_unigene26148 uagpf v2.0 272
AutoFact: ATP-synt_B multi-domain protein 6.0e-06
Blast2go: nucleic acid binding 0.0
unknown
uagpf_v2_unigene26492 uagpf v2.0 234
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
Blast2go: gamma tubulin 0.0
unknown
uagpf_v2_unigene27949 uagpf v2.0 371
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
Blast2go: beta chain 0.0
unknown
uagpf_v2_unigene28680 uagpf v2.0 427
AutoFact: Nitrate and chloride transporter n=1 Tax=Glycine max RepID=Q535K6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitrate and chloride transporter 0.0
Putative N-terminus
uagpf_v2_unigene29091 uagpf v2.0 352
AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9SPL4_RICCO 0.0
FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: homeobox-leucine zipper protein hdg11-like 0.0
Internal
uagpf_v2_unigene29829 uagpf v2.0 478
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: sp=SWI/SNF complex subunit SWI3B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
C-terminus
uagpf_v2_unigene30060 uagpf v2.0 508
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
Blast2go: f-box family protein 6.92407e-34
Coding
uagpf_v2_unigene30108 uagpf v2.0 394
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Internal
uagpf_v2_unigene30505 uagpf v2.0 569
AutoFact: Zn finger protein [Nicotiana tabacum] 2.0e-33
Blast2go: f-box family protein 3.1703e-41
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain