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Assembly Name: uagpf v2.0

Name: SWIRM domain

Term: IPR007526  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1765 uagpf v2.0 335
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
Internal
uagpf_v2_unigene2227 uagpf v2.0 461
AutoFact: SWI/SNF complex subunit SWI3A [Arabidopsis thaliana] sp|Q8W475.1|SWI3A_ARATH RecName: Full=SWI/SNF complex subunit SWI3A; Short=AtSWI3A; AltName: Full=Transcription regulatory protein SWI3A gb|AAL32872.1| putative SWI/SNF family transcription activator [A 0.0
Blast2go: swi snf complex subunit swi3a 0.0
unknown
uagpf_v2_unigene4045 uagpf v2.0 904
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Oryza sativa RepID=LDL3_ORYSJ 3.0e-37
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: flowering locus d 0.0
C-terminus
uagpf_v2_unigene4619 uagpf v2.0 683
AutoFact: Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] emb|CAB87783.1| putative protein [Arabidopsis thaliana] dbj|BAF01166.1| hypothetical protein [Arabidopsis thaliana] gb|AED92035.1| Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: surfeit locus protein 2 0.0
C-terminus
uagpf_v2_unigene6778 uagpf v2.0 766
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Putative C-terminus
uagpf_v2_unigene13140 uagpf v2.0 696
AutoFact: Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] emb|CAB87783.1| putative protein [Arabidopsis thaliana] dbj|BAF01166.1| hypothetical protein [Arabidopsis thaliana] gb|AED92035.1| Surfeit locus protein 2 (SURF2) [Arabidopsis thaliana] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: surfeit locus protein 2 0.0
N-terminus
uagpf_v2_unigene17694 uagpf v2.0 1788
AutoFact: Dof transcription factor n=1 Tax=Pinus pinaster RepID=B0BCH1_PINPS 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
uagpf_v2_unigene26362 uagpf v2.0 345
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
Internal
uagpf_v2_unigene27663 uagpf v2.0 502
AutoFact: Unassigned protein
Blast2go: lysine-specific histone demethylase 1 homolog 3-like 3.85211e-09
unknown
uagpf_v2_unigene28501 uagpf v2.0 519
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 2.0e-32
Blast2go: lysine-specific histone demethylase-like protein 0.0
unknown
uagpf_v2_unigene28908 uagpf v2.0 445
AutoFact: SWI/SNF complex subunit SWI3A [Arabidopsis thaliana] sp|Q8W475.1|SWI3A_ARATH RecName: Full=SWI/SNF complex subunit SWI3A; Short=AtSWI3A; AltName: Full=Transcription regulatory protein SWI3A gb|AAL32872.1| putative SWI/SNF family transcription activator [A 0.0
Blast2go: swi snf complex subunit swi3a 0.0
Coding
uagpf_v2_unigene29829 uagpf v2.0 478
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: sp=SWI/SNF complex subunit SWI3B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
C-terminus
uagpf_v2_unigene30060 uagpf v2.0 508
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
Blast2go: f-box family protein 6.92407e-34
Coding
uagpf_v2_unigene30705 uagpf v2.0 360
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
uagpf_v2_unigene34560 uagpf v2.0 210
AutoFact: Lysine-specific histone demethylase 1 homolog 3 n=3 Tax=Arabidopsis RepID=LDL3_ARATH 4.0e-10
FL-Next: sp=Lysine-specific histone demethylase 1 homolog 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: lysine-specific histone demethylase 1 homolog 3-like 2.28939e-12
Internal
uagpf_v2_unigene35474 uagpf v2.0 316
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 2.99878e-43
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Internal
uagpf_v2_unigene38305 uagpf v2.0 487
AutoFact: Lysine-specific histone demethylase, putative n=1 Tax=Ricinus communis RepID=B9R844_RICCO 2.0e-32
Blast2go: lysine-specific histone demethylase-like protein 0.0
unknown
uagpf_v2_unigene43339 uagpf v2.0 333
AutoFact: SWI/SNF complex subunit SWI3C [Arabidopsis thaliana] sp|Q9XI07.1|SWI3C_ARATH RecName: Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C; AltName: Full=Transcription regulatory protein SWI3C gb|AAD41423.1|AC007727_12 Contains similarity to gb|AF033823 moir 0.0
FL-Next: sp=SWI/SNF complex subunit SWI3C; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swi snf complex subunit swi3c-like 0.0
Internal
uagpf_v2_unigene44958 uagpf v2.0 351
AutoFact: Transcriptional adapter ADA2 n=9 Tax=Poaceae RepID=TADA2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional adapter ada2-like 0.0
N-terminus
uagpf_v2_unigene45588 uagpf v2.0 396
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain