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Assembly Name: uagpf v2.0

Name: Radical SAM

Term: IPR007197  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene726 uagpf v2.0 1420
AutoFact: biotin synthase [Brassica rapa subsp. pekinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin synthase 0.0
C-terminus
uagpf_v2_unigene1962 uagpf v2.0 1189
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Complete
uagpf_v2_unigene2196 uagpf v2.0 2308
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin-like protein 0.0
Putative Complete
uagpf_v2_unigene2426 uagpf v2.0 664
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene3206 uagpf v2.0 708
AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lipoic acid synthase 0.0
C-terminus
uagpf_v2_unigene3449 uagpf v2.0 532
AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9SE98_RICCO 0.0
FL-Next: sp=Molybdopterin biosynthesis protein CNX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: molybdopterin biosynthesis protein cnx3 0.0
C-terminus
uagpf_v2_unigene4557 uagpf v2.0 740
AutoFact: DUF21 domain containing protein 1.0e-35
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at2g14520-like 0.0
Internal
uagpf_v2_unigene6064 uagpf v2.0 822
AutoFact: RecName: Full=tRNA wybutosine-synthesizing protein 1 homolog gb|AAN65027.1| putative oxidoreductase [Oryza sativa Japonica Group] gb|ABF99122.1| radical S-adenosyl methionine and flavodoxin domains 1, isoform 1, putative, expressed [Oryza sativa Japonica 0.0
Blast2go: trna wybutosine-synthesizing protein 1 homolog 0.0
unknown
uagpf_v2_unigene6629 uagpf v2.0 1164
AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at4g14240-like 0.0
Putative N-terminus
uagpf_v2_unigene9146 uagpf v2.0 560
AutoFact: biotin synthase [Brassica rapa subsp. pekinensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: biotin synthase 0.0
N-terminus
uagpf_v2_unigene9559 uagpf v2.0 470
AutoFact: RecName: Full=tRNA wybutosine-synthesizing protein 1 homolog gb|AAN65027.1| putative oxidoreductase [Oryza sativa Japonica Group] gb|ABF99122.1| radical S-adenosyl methionine and flavodoxin domains 1, isoform 1, putative, expressed [Oryza sativa Japonica 0.0
FL-Next: sp=tRNA wybutosine-synthesizing protein 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna wybutosine-synthesizing protein 1 homolog 0.0
Internal
uagpf_v2_unigene9904 uagpf v2.0 745
AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
FL-Next: sp=CDK5RAP1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10836 uagpf v2.0 498
AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
C-terminus
uagpf_v2_unigene11060 uagpf v2.0 447
AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9SE98_RICCO 0.0
FL-Next: sp=Molybdopterin biosynthesis protein CNX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: molybdopterin biosynthesis protein cnx3 0.0
C-terminus
uagpf_v2_unigene12175 uagpf v2.0 737
AutoFact: DUF21 domain containing protein 1.0e-35
Blast2go: duf21 domain-containing protein at2g14520-like 0.0
Putative coding
uagpf_v2_unigene12220 uagpf v2.0 731
AutoFact: CBS and transporter associated domain-containing protein n=2 Tax=Arabidopsis RepID=F4IGE5_ARATH 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: duf21 domain-containing protein at2g14520-like 0.0
N-terminus
uagpf_v2_unigene12654 uagpf v2.0 470
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: sp=Probable methyltransferase PMT25; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ankyrin-like protein 0.0
Internal
uagpf_v2_unigene13225 uagpf v2.0 1869
AutoFact: CBS and transporter associated domain-containing protein [Arabidopsis thaliana] gb|AEC06308.1| CBS and transporter associated domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=DUF21 domain-containing protein At2g14520; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cbs domain-containing protein 0.0
Complete
uagpf_v2_unigene15140 uagpf v2.0 680
AutoFact: Elongator complex protein 3 n=16 Tax=Magnoliophyta RepID=ELP3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone acetyltransferase 0.0
C-terminus
uagpf_v2_unigene16783 uagpf v2.0 609
AutoFact: lipoyl synthase [Arabidopsis thaliana] sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl synthase, chloroplastic; AltName: Full=Lipoate synthase; Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase, plastidial; Short=LIP1p; AltName: Full=Lipoic acid synthas 0.0
FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain