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Assembly Name: uagpf v2.0

Name: Radical SAM

Term: IPR007197  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene16867 uagpf v2.0 814
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 0.0
C-terminus
uagpf_v2_unigene17477 uagpf v2.0 758
• AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=DUF21 domain-containing protein At4g14230; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: duf21 domain-containing protein at4g14240-like 0.0
C-terminus
uagpf_v2_unigene17771 uagpf v2.0 714
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin-like protein 0.0
Complete
uagpf_v2_unigene20300 uagpf v2.0 357
• AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=DUF21 domain-containing protein At4g14240; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: duf21 domain-containing protein at4g14240-like 0.0
N-terminus
uagpf_v2_unigene25357 uagpf v2.0 504
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin-like protein 0.0
Internal
uagpf_v2_unigene25497 uagpf v2.0 581
• AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: Isoform 2 of DUF21 domain-containing protein At4g14240 OS=Arabidopsis thaliana GN=CBSDUF1 0.0
• Blast2go: duf21 domain-containing protein at4g14240-like 0.0
C-terminus
uagpf_v2_unigene25956 uagpf v2.0 425
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: radical sam domain-containing protein 0.0
C-terminus
uagpf_v2_unigene26071 uagpf v2.0 449
• AutoFact: Lipoyl synthase, mitochondrial n=1 Tax=Picea sitchensis RepID=LIAS_PICSI 0.0
• FL-Next: sp=Lipoyl synthase, mitochondrial; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: lipoic acid synthase 0.0
N-terminus
uagpf_v2_unigene26385 uagpf v2.0 398
• AutoFact: UPF0004 multi-domain protein 1.0e-24
• Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
unknown
uagpf_v2_unigene27565 uagpf v2.0 544
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable methyltransferase pmt11-like 0.0
Internal
uagpf_v2_unigene27673 uagpf v2.0 426
• AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: duf21 domain-containing protein at4g14240-like 0.0
unknown
uagpf_v2_unigene27703 uagpf v2.0 305
• AutoFact: FO synthase [Azoarcus sp. EbN1] emb|CAI10697.1| hypothetical protein, similar to ThiH,4-methyl-5(beta-hydroxyethyl)thiazole phosphate synthesis [Aromatoleum aromaticum EbN1] 0.0
• Blast2go: fo synthase 0.0
unknown
uagpf_v2_unigene28633 uagpf v2.0 557
• AutoFact: DUF21 domain containing protein 1.0e-35
• FL-Next: sp=DUF21 domain-containing protein At5g52790; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: duf21 domain-containing protein at2g14520-like 0.0
Putative N-terminus
uagpf_v2_unigene29421 uagpf v2.0 224
• AutoFact: Molybdopterin cofactor synthesis protein A, putative n=1 Tax=Ricinus communis RepID=B9REL9_RICCO 0.0
• Blast2go: molybdopterin biosynthesis protein cnx2-like 0.0
unknown
uagpf_v2_unigene30478 uagpf v2.0 357
• AutoFact: DUF248 multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene31768 uagpf v2.0 491
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable methyltransferase pmt11-like 0.0
N-terminus
uagpf_v2_unigene33803 uagpf v2.0 473
• AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9R7T9_RICCO 3.0e-20
• FL-Next: sp=tRNA wybutosine-synthesizing protein 1 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flavodoxin family protein 7.87833e-21
Putative N-terminus
uagpf_v2_unigene35126 uagpf v2.0 94
• AutoFact: Similar to CDK5 regulatory subunit-associated protein n=1 Tax=Nicotiana tabacum RepID=Q75WU8_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene35276 uagpf v2.0 310
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• Blast2go: atp binding 0.0
Coding
uagpf_v2_unigene35571 uagpf v2.0 176
• AutoFact: CBS and DUF21 domain-containing protein [Arabidopsis thaliana] dbj|BAD44531.1| unnamed protein product [Arabidopsis thaliana] gb|AEE83399.1| CBS and DUF21 domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=Putative DUF21 domain-containing protein At1g03270; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: duf21 domain-containing protein at4g14240-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain