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Assembly Name: uagpf v2.0

Name: Protein of unknown function DUF642

Term: IPR006946  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene700 uagpf v2.0 334
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene5084 uagpf v2.0 559
AutoFact: Unassigned protein
Blast2go: uncharacterized protein loc100255705 0.0
unknown
uagpf_v2_unigene8271 uagpf v2.0 1763
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative Complete
uagpf_v2_unigene13760 uagpf v2.0 463
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene14917 uagpf v2.0 870
AutoFact: WS00722.B21_A03 WS-PS-N-A-8 Picea glauca cDNA clone WS00722_A03 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative Complete
uagpf_v2_unigene17901 uagpf v2.0 1462
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
uagpf_v2_unigene19246 uagpf v2.0 483
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene19373 uagpf v2.0 1663
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
Complete
uagpf_v2_unigene30486 uagpf v2.0 415
AutoFact: WS00722.B21_A03 WS-PS-N-A-8 Picea glauca cDNA clone WS00722_A03 3', mRNA sequence. 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene33106 uagpf v2.0 396
AutoFact: WS00742.C21_H21 WS-PS-N-A-8 Picea glauca cDNA clone WS00742_H21 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene34012 uagpf v2.0 314
AutoFact: WS00742.C21_H21 WS-PS-N-A-8 Picea glauca cDNA clone WS00742_H21 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene36063 uagpf v2.0 616
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene44628 uagpf v2.0 224
AutoFact: DUF642 domain containing protein 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene49316 uagpf v2.0 295
AutoFact: uncharacterized protein [Arabidopsis thaliana] emb|CAB87702.1| putative protein [Arabidopsis thaliana] gb|AAK76721.1| unknown protein [Arabidopsis thaliana] gb|AAM20000.1| unknown protein [Arabidopsis thaliana] gb|AED91677.1| uncharacterized protein [Arab 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 4.48702e-21
Putative N-terminus
uagpf_v2_unigene51835 uagpf v2.0 287
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g74600-like protein 0.0
Internal
uagpf_v2_unigene53432 uagpf v2.0 357
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
uagpf_v2_unigene53670 uagpf v2.0 491
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative C-terminus
uagpf_v2_unigene53987 uagpf v2.0 426
AutoFact: DUF642 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain