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Assembly Name: uagpf v2.0

Name: Spen paralogue and orthologue SPOC, C-terminal

Term: IPR012921  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene734 uagpf v2.0 1022
AutoFact: SPOC multi-domain protein 2.0e-17
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Coding
uagpf_v2_unigene1057 uagpf v2.0 635
AutoFact: FPA (Fragment) n=1 Tax=Pisum sativum RepID=Q52ZH7_PEA 6.00036e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 7.00649e-45
Internal
uagpf_v2_unigene2957 uagpf v2.0 814
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
N-terminus
uagpf_v2_unigene3885 uagpf v2.0 817
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Internal
uagpf_v2_unigene4618 uagpf v2.0 788
AutoFact: nucleic acid binding protein [Arabidopsis thaliana] gb|AAM13844.1| unknown protein [Arabidopsis thaliana] gb|AEE30872.1| nucleic acid binding protein [Arabidopsis thaliana] 1.0e-16
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: nucleic acid binding protein 5.54161e-25
Internal
uagpf_v2_unigene11356 uagpf v2.0 414
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
Blast2go: flowering time control protein fpa 0.0
unknown
uagpf_v2_unigene11493 uagpf v2.0 481
AutoFact: SPOC multi-domain protein 2.0e-17
Blast2go: spoc domain transcription elongation factor s-ii protein 0.0
Coding
uagpf_v2_unigene15782 uagpf v2.0 729
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
C-terminus
uagpf_v2_unigene26441 uagpf v2.0 407
AutoFact: FPA (Fragment) n=1 Tax=Pisum sativum RepID=Q52ZH7_PEA 6.00036e-42
Blast2go: flowering time control protein fpa 7.00649e-45
unknown
uagpf_v2_unigene27687 uagpf v2.0 360
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene28124 uagpf v2.0 335
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene29669 uagpf v2.0 75
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
unknown
uagpf_v2_unigene31729 uagpf v2.0 523
AutoFact: RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene32620 uagpf v2.0 240
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
Blast2go: flowering time control protein fpa 0.0
Coding
uagpf_v2_unigene39459 uagpf v2.0 247
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEZ1_RICCO 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Internal
uagpf_v2_unigene40031 uagpf v2.0 265
AutoFact: RNA recognition motif-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SU08_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: flowering time control protein fpa 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain