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Assembly Name: uagpf v2.0

Name: Reticulon

Term: IPR003388  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene25 uagpf v2.0 498
AutoFact: reticulon-like protein B22 [Arabidopsis thaliana] sp|Q8GWH5.1|RTNLT_ARATH RecName: Full=Reticulon-like protein B22; Short=AtRTNLB22 dbj|BAC43428.1| unknown protein [Arabidopsis thaliana] gb|AAO63877.1| unknown protein [Arabidopsis thaliana] gb|AEE36170.1| 7.0e-37
Blast2go: reticulon-like protein b22 0.0
unknown
uagpf_v2_unigene5394 uagpf v2.0 660
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
uagpf_v2_unigene7478 uagpf v2.0 1040
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene7970 uagpf v2.0 638
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 3.0e-35
FL-Next: sp=Reticulon-like protein B18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.3497e-40
Putative C-terminus
uagpf_v2_unigene8097 uagpf v2.0 810
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
FL-Next: sp=Reticulon-like protein B21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene8217 uagpf v2.0 1552
AutoFact: reticulon-like protein B8 [Arabidopsis thaliana] ref|NP_850551.1| reticulon-like protein B8 [Arabidopsis thaliana] sp|Q9SS37.1|RTNLH_ARATH RecName: Full=Reticulon-like protein B8; Short=AtRTNLB8 gb|AAF02816.1|AC009400_12 unknown protein [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b8 0.0
Complete
uagpf_v2_unigene10202 uagpf v2.0 595
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AAF79453.1|AC025808_35 F18O14.8 [Arabidopsis thaliana] gb|AAM65662.1| unknown [Arabidopsis thaliana] gb|ABG25079.1| At1g19360 [Arabidopsis thaliana] dbj|BAF00917.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide-diphospho-sugar transferase family protein 0.0
N-terminus
uagpf_v2_unigene11834 uagpf v2.0 717
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
C-terminus
uagpf_v2_unigene12313 uagpf v2.0 883
AutoFact: Reticulon-like protein B23 n=1 Tax=Arabidopsis thaliana RepID=RTNLU_ARATH 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b22 8.47156e-34
C-terminus
uagpf_v2_unigene12655 uagpf v2.0 646
AutoFact: reticulon-like protein B21 [Arabidopsis thaliana] sp|Q56X72.2|RTNLS_ARATH RecName: Full=Reticulon-like protein B21; Short=AtRTNLB21 gb|AED96983.1| reticulon-like protein B21 [Arabidopsis thaliana] 0.0
FL-Next: sp=Reticulon-like protein B21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene13509 uagpf v2.0 1354
AutoFact: reticulon-like protein B16 [Arabidopsis thaliana] sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like protein B16; Short=AtRTNLB16 dbj|BAC42275.1| unknown protein [Arabidopsis thaliana] gb|AAO50641.1| unknown protein [Arabidopsis thaliana] gb|AEE74972.1| 1.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: reticulon-like protein b12 0.0
Complete
uagpf_v2_unigene13663 uagpf v2.0 619
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
N-terminus
uagpf_v2_unigene15647 uagpf v2.0 790
AutoFact: 24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
N-terminus
uagpf_v2_unigene15839 uagpf v2.0 966
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
C-terminus
uagpf_v2_unigene16650 uagpf v2.0 681
AutoFact: reticulon-like protein B16 [Arabidopsis thaliana] sp|Q8GYH6.1|RTNLP_ARATH RecName: Full=Reticulon-like protein B16; Short=AtRTNLB16 dbj|BAC42275.1| unknown protein [Arabidopsis thaliana] gb|AAO50641.1| unknown protein [Arabidopsis thaliana] gb|AEE74972.1| 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene17405 uagpf v2.0 1690
AutoFact: Reticulon domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 24 kda seed maturation protein 0.0
Complete
uagpf_v2_unigene19809 uagpf v2.0 1091
AutoFact: Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana] gb|AAF79453.1|AC025808_35 F18O14.8 [Arabidopsis thaliana] gb|AAM65662.1| unknown [Arabidopsis thaliana] gb|ABG25079.1| At1g19360 [Arabidopsis thaliana] dbj|BAF00917.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotide-diphospho-sugar transferase family protein 0.0
C-terminus
uagpf_v2_unigene26608 uagpf v2.0 348
AutoFact: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Arabidopsis thaliana] sp|Q67ZE1.2|HSDD2_ARATH RecName: Full=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2; Short=At3BETAHSD/D2; AltName: Full=4alpha-carboxysterol-C3-dehydrogenase/C4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3beta-hydroxysteroid-dehydrogenase decarboxylase isoform 2 0.0
Internal
uagpf_v2_unigene26907 uagpf v2.0 332
AutoFact: Reticulon domain containing protein 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene27047 uagpf v2.0 403
AutoFact: Unassigned protein
Blast2go: glycosyltransferase-like protein 0.0
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain