Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Dyskerin-like

Term: IPR012960  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene474 uagpf v2.0 515
• AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
• FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene9666 uagpf v2.0 530
• AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene12095 uagpf v2.0 433
• AutoFact: Glycine-rich RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T555_RICCO 2.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.71132e-36
N-terminus
uagpf_v2_unigene12920 uagpf v2.0 460
• AutoFact: FAP multi-domain protein 2.0e-18
Coding
uagpf_v2_unigene15241 uagpf v2.0 805
• AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
• FL-Next: sp=H/ACA ribonucleoprotein complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene17258 uagpf v2.0 683
• AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 1.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycine-rich rna-binding 1.10115e-27
N-terminus
uagpf_v2_unigene17348 uagpf v2.0 806
• AutoFact: Glycine-rich RNA-binding protein n=4 Tax=Pinaceae RepID=Q9XEL4_PICGL 3.00004e-41
• FL-Next: tr=Glycine-rich RNA-binding protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: glycine-rich rna-binding protein 0.0
N-terminus
uagpf_v2_unigene17920 uagpf v2.0 653
• AutoFact: RNA-binding protein n=1 Tax=Nicotiana tabacum RepID=Q941H9_TOBAC 3.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: glycine-rich rna-binding 3.90236e-26
N-terminus
uagpf_v2_unigene36155 uagpf v2.0 669
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 4.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 2.8026e-45
N-terminus
uagpf_v2_unigene53805 uagpf v2.0 345
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_849832.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana] gb|AAM65738.1| RNA binding protein, putativ 3.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rna recognition motif-containing protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain