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Assembly Name: uagpf v2.0

Name: HhH-GPD domain

Term: IPR003265  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene26713 uagpf v2.0 291
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 2.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon unclassified 1.09305e-40
Internal
uagpf_v2_unigene27342 uagpf v2.0 261
AutoFact: RVT_2 domain containing protein 1.0e-14
FL-Next: sp=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene28629 uagpf v2.0 188
AutoFact: DNA glycosylase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MTP0_POPTR 0.0
FL-Next: sp=Protein ROS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna glycosylase 0.0
C-terminus
uagpf_v2_unigene29391 uagpf v2.0 423
AutoFact: putative GTP-binding protein [Arabidopsis thaliana] emb|CAB87708.1| putative GTP-binding protein [Arabidopsis thaliana] gb|AAL25554.1| AT5g11480/F15N18_70 [Arabidopsis thaliana] gb|AAN28859.1| At5g11480/F15N18_70 [Arabidopsis thaliana] gb|AED91684.1| puta 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
C-terminus
uagpf_v2_unigene32335 uagpf v2.0 459
AutoFact: Unassigned protein
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: hypothetical protein VITISV_042009 [Vitis vinifera] 0.0
Putative C-terminus
uagpf_v2_unigene33110 uagpf v2.0 353
AutoFact: Putative polyprotein n=1 Tax=Solanum habrochaites RepID=B3TPP6_SOLHA 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ac079131_10 copia-type 3.62119e-28
Putative N-terminus
uagpf_v2_unigene34200 uagpf v2.0 420
AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene34414 uagpf v2.0 421
AutoFact: Transcriptional activator DEMETER n=2 Tax=Arabidopsis thaliana RepID=DME_ARATH 5.0e-27
Blast2go: transcriptional activator demeter 2.87142e-30
Putative coding
uagpf_v2_unigene35648 uagpf v2.0 133
AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: n-glycosylase dna lyase 7.42815e-29
Internal
uagpf_v2_unigene36246 uagpf v2.0 505
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 1.0e-26
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-3-methyladenine glycosylase 1 8.02557e-32
C-terminus
uagpf_v2_unigene38202 uagpf v2.0 332
AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
Blast2go: ubc37 like protein 0.0
Coding
uagpf_v2_unigene40203 uagpf v2.0 363
AutoFact: HhH-GPD domain containing protein 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene41266 uagpf v2.0 353
AutoFact: ubiquitin conjugating enzyme-like [Oryza sativa Japonica Group] 0.0
Blast2go: ubc37 like protein 0.0
Putative coding
uagpf_v2_unigene41998 uagpf v2.0 443
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene42888 uagpf v2.0 298
AutoFact: rve domain containing protein 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.98257e-27
Internal
uagpf_v2_unigene45045 uagpf v2.0 469
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene47066 uagpf v2.0 370
AutoFact: barley mlo defense gene homolog2 [Zea mays] gb|AAK38338.1| seven transmembrane protein Mlo2 [Zea mays] gb|ACN28009.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene47181 uagpf v2.0 401
AutoFact: A/G-specific adenine glycosylase [Arabidopsis thaliana] gb|AEE83174.1| A/G-specific adenine glycosylase [Arabidopsis thaliana] 0.0
FL-Next: tr=A/G-specific adenine DNA glycosylase, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: a g-specific adenine dna glycosylase 0.0
Internal
uagpf_v2_unigene48735 uagpf v2.0 337
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene49917 uagpf v2.0 287
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 1.0e-26
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-3-methyladenine glycosylase 1 8.02557e-32
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain