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Assembly Name: uagpf v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene47854 uagpf v2.0 303
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
Blast2go: transparent testa 12 0.0
unknown
uagpf_v2_unigene47903 uagpf v2.0 272
AutoFact: SNF2 family DNA-dependent ATPase (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TTS1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromodomain-helicase-dna-binding protein 2-like 0.0
Internal
uagpf_v2_unigene48380 uagpf v2.0 387
AutoFact: putative transcriptional regulator [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene48700 uagpf v2.0 355
AutoFact: cohesin complex subunit SA-1/2 [Arabidopsis thaliana] emb|CAB45374.1| stromalin protein [Arabidopsis thaliana] gb|AAL36271.1| putative putative sister-chromatide cohesion protein [Arabidopsis thaliana] gb|AAC63652.2| putative putative sister-chromatide co 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: sister-chromatide cohesion protein 0.0
Internal
uagpf_v2_unigene48735 uagpf v2.0 337
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene49781 uagpf v2.0 419
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 1.0e-25
Blast2go: histone h1-like protein 3.10277e-31
Coding
uagpf_v2_unigene49806 uagpf v2.0 572
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 4.0e-30
FL-Next: sp=Formin-like protein 6; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 2.55616e-34
Internal
uagpf_v2_unigene49917 uagpf v2.0 287
AutoFact: DNA-3-methyladenine glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S6F5_RICCO 1.0e-26
FL-Next: tr=DNA-3-methyladenine glycosylase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dna-3-methyladenine glycosylase 1 8.02557e-32
Putative C-terminus
uagpf_v2_unigene50051 uagpf v2.0 603
AutoFact: AT-hook DNA-binding protein [Catharanthus roseus] 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 1.01081e-28
C-terminus
uagpf_v2_unigene50201 uagpf v2.0 353
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
Blast2go: histone-like protein 0.0
unknown
uagpf_v2_unigene50212 uagpf v2.0 529
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
uagpf_v2_unigene50398 uagpf v2.0 411
AutoFact: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] ref|NP_001117233.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gb|AAF79721.1|AC005106_2 T25N20.3 [Arabidopsis 0.0
unknown
uagpf_v2_unigene50801 uagpf v2.0 344
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
Blast2go: protein ariadne- 0.0
unknown
uagpf_v2_unigene50891 uagpf v2.0 383
AutoFact: proteinaceous RNase P 1 [Arabidopsis thaliana] sp|Q66GI4.1|PP179_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32230, mitochondrial; Flags: Precursor gb|AAU05541.1| At2g32230 [Arabidopsis thaliana] gb|AEC08652.1| proteinaceous RNase 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Coding
uagpf_v2_unigene51007 uagpf v2.0 561
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene51589 uagpf v2.0 396
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 2.0e-23
Blast2go: histone h1-like protein 0.0
Coding
uagpf_v2_unigene51782 uagpf v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease p protein subunit p25 8.81894e-26
N-terminus
uagpf_v2_unigene52222 uagpf v2.0 362
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene52686 uagpf v2.0 505
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
Blast2go: at hook motif dna-binding family protein 0.0
unknown
uagpf_v2_unigene53632 uagpf v2.0 248
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain