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Assembly Name: uagpf v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene18548 uagpf v2.0 1035
AutoFact: DUF3444 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene18567 uagpf v2.0 650
AutoFact: DUF296 domain containing protein 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
C-terminus
uagpf_v2_unigene18715 uagpf v2.0 499
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus
uagpf_v2_unigene18787 uagpf v2.0 1870
AutoFact: AT hook motif-containing protein [Arabidopsis thaliana] dbj|BAH20420.1| AT5G54930 [Arabidopsis thaliana] gb|AED96559.1| AT hook motif-containing protein [Arabidopsis thaliana] 6.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at hook motif-containing protein 0.0
Complete
uagpf_v2_unigene18896 uagpf v2.0 581
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-26
Blast2go: histone-like protein 0.0
unknown
uagpf_v2_unigene19532 uagpf v2.0 2447
AutoFact: putative methyltransferase PMT2 [Arabidopsis thaliana] ref|NP_849710.1| putative methyltransferase PMT2 [Arabidopsis thaliana] sp|B9DFI7.2|PMT2_ARATH RecName: Full=Probable methyltransferase PMT2 gb|AAK59830.1| At1g26850/T2P11_4 [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
Complete
uagpf_v2_unigene19565 uagpf v2.0 941
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 3.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Complete
uagpf_v2_unigene25474 uagpf v2.0 315
AutoFact: Unassigned protein
Blast2go: methyl binding domain protein 2.07723e-35
unknown
uagpf_v2_unigene25792 uagpf v2.0 905
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein map65-1a 0.0
C-terminus
uagpf_v2_unigene26195 uagpf v2.0 475
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 9.94922e-44
Blast2go: at hook motif dna-binding family protein 0.0
unknown
uagpf_v2_unigene26482 uagpf v2.0 347
AutoFact: homeobox protein HAT3.1 [Arabidopsis thaliana] sp|Q04996.3|HAT31_ARATH RecName: Full=Homeobox protein HAT3.1 dbj|BAC41784.1| putative homeobox protein HAT3.1 [Arabidopsis thaliana] gb|AAO64900.1| At3g19510 [Arabidopsis thaliana] gb|AEE76250.1| homeobox pr 0.0
Blast2go: homeobox protein 0.0
Coding
uagpf_v2_unigene26775 uagpf v2.0 513
AutoFact: WS02925.CR_M21 SS-IB-A-FL-15 Picea sitchensis cDNA clone WS02925_M21 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna-binding protein chloroplast 0.0
Internal
uagpf_v2_unigene26876 uagpf v2.0 385
AutoFact: Alba multi-domain protein 6.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alba-like protein c9orf23 homolog 0.0
N-terminus
uagpf_v2_unigene26889 uagpf v2.0 448
AutoFact: putative formamidopyrimidine-DNA glycosylase 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: formamidopyrimidine-dna glycosylase 0.0
N-terminus
uagpf_v2_unigene27026 uagpf v2.0 399
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Internal
uagpf_v2_unigene27085 uagpf v2.0 323
AutoFact: DUF296 multi-domain protein 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein escarola-like 0.0
Internal
uagpf_v2_unigene27171 uagpf v2.0 408
AutoFact: SET domain protein SDG111 [Zea mays] gb|AAO32934.2| SET domain protein SDG111 [Zea mays] 0.0
FL-Next: sp=Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: histone-lysine n- h3 lysine-9 specific suvh1 0.0
Internal
uagpf_v2_unigene27305 uagpf v2.0 648
AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ariadne- 0.0
C-terminus
uagpf_v2_unigene27434 uagpf v2.0 295
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 4.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna-binding protein chloroplast 8.89514e-39
Putative N-terminus
uagpf_v2_unigene27597 uagpf v2.0 492
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDQ4_RICCO 0.0
Blast2go: dna binding 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain