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Assembly Name: uagpf v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene4110 uagpf v2.0 1011
AutoFact: JmjC domain containing protein 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor jumonji domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene4159 uagpf v2.0 646
AutoFact: Histone-lysine n-methyltransferase, suvh, putative n=1 Tax=Ricinus communis RepID=B9SHW2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene4180 uagpf v2.0 1480
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 65-kda microtubule-associated protein 3-like 0.0
C-terminus
uagpf_v2_unigene4667 uagpf v2.0 722
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
C-terminus
uagpf_v2_unigene5074 uagpf v2.0 827
AutoFact: putative AT-hook DNA-binding protein [Oryza sativa Japonica Group] gb|EAZ07603.1| hypothetical protein OsI_29854 [Oryza sativa Indica Group] 5.60519e-45
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene5152 uagpf v2.0 786
AutoFact: Protein RCC2, putative n=1 Tax=Ricinus communis RepID=B9R853_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulator of chromosome condensation family protein 0.0
Putative N-terminus
uagpf_v2_unigene5319 uagpf v2.0 1910
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9SYY2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated proteins 65-1 0.0
C-terminus
uagpf_v2_unigene5332 uagpf v2.0 371
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
unknown
uagpf_v2_unigene5389 uagpf v2.0 836
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleic acid binding 0.0
N-terminus
uagpf_v2_unigene5657 uagpf v2.0 573
AutoFact: PLE, putative n=1 Tax=Ricinus communis RepID=B9S7E4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: microtubule-associated protein 65-7 0.0
N-terminus
uagpf_v2_unigene6507 uagpf v2.0 628
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 3.10277e-31
N-terminus
uagpf_v2_unigene6527 uagpf v2.0 371
AutoFact: AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_850215.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_973590.1| AT hook motif DNA-binding family protein [Arabidopsis thaliana] ref|NP_001118437.1| AT hook m 8.40779e-45
Blast2go: at hook motif dna-binding family protein 0.0
unknown
uagpf_v2_unigene6658 uagpf v2.0 654
AutoFact: syntaxin [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: syntaxin 0.0
C-terminus
uagpf_v2_unigene6724 uagpf v2.0 455
AutoFact: Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] dbj|BAF00863.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86755.1| Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] 0.0
FL-Next: sp=B3 domain-containing protein Os03g0184500; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
N-terminus
uagpf_v2_unigene6793 uagpf v2.0 582
AutoFact: Putative ripening regulated protein [Oryza sativa Japonica Group] gb|ABF94378.1| MatE family protein, expressed [Oryza sativa Japonica Group] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein TRANSPARENT TESTA 12 0.0
C-terminus
uagpf_v2_unigene6994 uagpf v2.0 614
AutoFact: Alba multi-domain protein 2.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene7519 uagpf v2.0 453
AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 1.0e-31
FL-Next: sp=Zinc finger CCCH domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 44-like 0.0
Internal
uagpf_v2_unigene7632 uagpf v2.0 437
AutoFact: protein TRANSPARENT TESTA 12 [Arabidopsis thaliana] sp|Q9LYT3.1|TT12_ARATH RecName: Full=Protein TRANSPARENT TESTA 12; AltName: Full=MATE efflux family protein TT12; AltName: Full=Protein DTX41 emb|CAB86931.1| putative protein [Arabidopsis thaliana] emb|C 0.0
Blast2go: transparent testa 12 0.0
Coding
uagpf_v2_unigene7654 uagpf v2.0 1892
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete
uagpf_v2_unigene7940 uagpf v2.0 510
AutoFact: switch 2 [Arabidopsis thaliana] gb|AEE27606.1| switch 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 super family 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain