Sustainpine_db
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Assembly Name: uagpf v2.0

Name: AT hook, DNA-binding motif

Term: IPR017956  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene54022 uagpf v2.0 698
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete
uagpf_v2_unigene54064 uagpf v2.0 381
AutoFact: DUF296 domain containing protein 1.0e-35
Blast2go: dna-binding protein escarola-like 0.0
Putative coding
uagpf_v2_unigene54209 uagpf v2.0 296
AutoFact: Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] dbj|BAF00863.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86755.1| Zinc-finger domain of monoamine-oxidase A repressor R1 [Arabidopsis thaliana] 0.0
Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
Putative coding
uagpf_v2_unigene54266 uagpf v2.0 403
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 5.23859e-34
N-terminus
uagpf_v2_unigene54534 uagpf v2.0 518
AutoFact: AT hook motif-containing protein [Arabidopsis thaliana] dbj|BAH20420.1| AT5G54930 [Arabidopsis thaliana] gb|AED96559.1| AT hook motif-containing protein [Arabidopsis thaliana] 6.0e-13
Blast2go: at hook motif-containing protein 0.0
unknown
uagpf_v2_unigene55153 uagpf v2.0 454
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RTA3_PHYPA 9.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
Putative N-terminus
uagpf_v2_unigene55247 uagpf v2.0 472
AutoFact: Histone H1 linker n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RX26_PHYPA 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain