Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41095 uagpf v2.0 365
AutoFact: tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] ref|NP_173210.3| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] gb|AAN86156.1| unknown protein [Arabidopsis thaliana] gb|AEE29620.1| tetratricopeptide repea 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: general transcription factor 3c polypeptide 3-like 0.0
Putative C-terminus
uagpf_v2_unigene41377 uagpf v2.0 375
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
Blast2go: rna helicase 0.0
Coding
uagpf_v2_unigene41439 uagpf v2.0 355
AutoFact: XPA-binding protein, putative; K12867 pre-mRNA-splicing factor SYF1 0.0
Blast2go: pre-mrna-splicing factor syf1-like 0.0
unknown
uagpf_v2_unigene41577 uagpf v2.0 169
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Putative C-terminus
uagpf_v2_unigene41621 uagpf v2.0 442
AutoFact: Plant RNA cleavage stimulation factor, putative n=1 Tax=Ricinus communis RepID=B9S078_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: mrna 3 -end-processing protein rna14 0.0
Putative N-terminus
uagpf_v2_unigene41646 uagpf v2.0 299
AutoFact: heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene41998 uagpf v2.0 443
AutoFact: Gag-Pol polyprotein n=1 Tax=Lotus japonicus RepID=B8YLY7_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene42218 uagpf v2.0 453
AutoFact: peroxisomal targeting signal 1 receptor [Nicotiana tabacum] 0.0
FL-Next: sp=Peroxisome biogenesis protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: peroxisome biogenesis protein 5-like 0.0
N-terminus
uagpf_v2_unigene42247 uagpf v2.0 329
AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat protein 13-like 0.0
Internal
uagpf_v2_unigene42401 uagpf v2.0 415
AutoFact: Unassigned protein
Blast2go: tetratricopeptide repeat domain-containing protein 2.8026e-45
unknown
uagpf_v2_unigene42673 uagpf v2.0 283
AutoFact: NMDA receptor-regulated protein, putative n=1 Tax=Ricinus communis RepID=B9RUV2_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
uagpf_v2_unigene42888 uagpf v2.0 298
AutoFact: rve domain containing protein 3.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.98257e-27
Internal
uagpf_v2_unigene43320 uagpf v2.0 354
AutoFact: Unassigned protein
Blast2go: protein 1.47226e-35
unknown
uagpf_v2_unigene43362 uagpf v2.0 287
AutoFact: anaphase-promoting complex subunit 8-like protein [Oryza sativa] 7.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: anaphase-promoting complex subunit 8-like 0.0
Internal
uagpf_v2_unigene43402 uagpf v2.0 218
AutoFact: multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene43606 uagpf v2.0 352
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
Blast2go: kinesin light 0.0
unknown
uagpf_v2_unigene43888 uagpf v2.0 322
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable udp-n-acetylglucosamine--peptide n-acetylglucosaminyltransferase spindly-like 0.0
Internal
uagpf_v2_unigene44079 uagpf v2.0 237
AutoFact: heat shock protein DnaJ N-terminal domain-containing protein [Musa acuminata] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene44260 uagpf v2.0 360
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9T299_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene44306 uagpf v2.0 283
AutoFact: Dead box ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9SAD3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead box rna helicase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain