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Assembly Name: uagpf v2.0

Name: Tetratricopeptide repeat-containing domain

Term: IPR013026  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene36008 uagpf v2.0 507
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590 gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AEE35086.1| F-box protein [Arabidopsis t 0.0
FL-Next: sp=F-box protein At1g70590; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 0.0
C-terminus
uagpf_v2_unigene36121 uagpf v2.0 431
AutoFact: FAP multi-domain protein 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein loc100784254 1.70422e-38
C-terminus
uagpf_v2_unigene36351 uagpf v2.0 507
AutoFact: Chaperone binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTA1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
N-terminus
uagpf_v2_unigene36363 uagpf v2.0 481
AutoFact: Unassigned protein
Blast2go: o-linked n-acetylglucosamine 1.00893e-43
unknown
uagpf_v2_unigene36423 uagpf v2.0 571
AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
Blast2go: rotamase fkbp 1 0.0
unknown
uagpf_v2_unigene36514 uagpf v2.0 447
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RJ86_RICCO 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
Putative coding
uagpf_v2_unigene36688 uagpf v2.0 452
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
N-terminus
uagpf_v2_unigene36783 uagpf v2.0 411
AutoFact: kinesin light chain-related protein [Arabidopsis thaliana] gb|AAU94395.1| At5g53080 [Arabidopsis thaliana] gb|AED96301.1| kinesin light chain-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene36866 uagpf v2.0 433
AutoFact: tetratricopetide-repeat thioredoxin-like 3 [Arabidopsis thaliana] gb|AAK32908.1|AF367321_1 At2g42580/F14N22.15 [Arabidopsis thaliana] gb|AAD22995.2| expressed protein [Arabidopsis thaliana] gb|AAN28880.1| At2g42580/F14N22.15 [Arabidopsis thaliana] gb|AEC1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tpr repeat-containing thioredoxin ttl1-like 0.0
Putative C-terminus
uagpf_v2_unigene36984 uagpf v2.0 673
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: like protein domain-containing protein 0.0
Internal
uagpf_v2_unigene37087 uagpf v2.0 369
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: like protein domain-containing protein 0.0
N-terminus
uagpf_v2_unigene37107 uagpf v2.0 344
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAC98059.1| chloroplast lumen common protein family [Arabidopsis thaliana] gb|ABI49479.1| At2g37400 [Arabidopsis thaliana] gb|AEC09393.1| tetratricopeptide repeat domain-containi 1.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene37343 uagpf v2.0 277
AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
FL-Next: tr=Tetratricopeptide repeat protein, tpr, putative; Ricinus communis (Castor bean). 0.0
Blast2go: tetratricopeptide repeat protein 0.0
Putative N-terminus
uagpf_v2_unigene37357 uagpf v2.0 435
AutoFact: octicosapeptide/Phox/Be.1 domain-containing protein [Arabidopsis thaliana] gb|AAF70848.1|AC003113_15 F2401.12 [Arabidopsis thaliana] gb|AAL87265.1| unknown protein [Arabidopsis thaliana] gb|AAM45044.1| unknown protein [Arabidopsis thaliana] gb|AEE33961.1| 0.0
Blast2go: heat shock protein 70 -interacting 0.0
Coding
uagpf_v2_unigene37608 uagpf v2.0 604
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
Internal
uagpf_v2_unigene37782 uagpf v2.0 264
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
Blast2go: tpr domain protein 0.0
unknown
uagpf_v2_unigene38041 uagpf v2.0 361
AutoFact: Ethylene-overproduction protein 1 n=5 Tax=Brassicaceae RepID=ETO1_ARATH 0.0
FL-Next: sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene38077 uagpf v2.0 449
AutoFact: Calmodulin-binding protein MPCBP n=2 Tax=Andropogoneae RepID=B6U2D5_MAIZE 3.00004e-41
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: calmodulin-binding protein mpcbp 0.0
Internal
uagpf_v2_unigene38182 uagpf v2.0 319
AutoFact: pfam01425, Amidase, Amidase 2.8026e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: amidase family protein 0.0
C-terminus
uagpf_v2_unigene38197 uagpf v2.0 453
AutoFact: cohesin-load domain-containing protein [Arabidopsis thaliana] dbj|BAB09745.1| unnamed protein product [Arabidopsis thaliana] gb|AED96068.1| cohesin-load domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mau2 chromatid cohesion factor homolog 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain