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Assembly Name: uagpf v2.0

Name: VHS

Term: IPR002014  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene661 uagpf v2.0 1761
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S215_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: target of myb protein 1 0.0
Complete
uagpf_v2_unigene723 uagpf v2.0 570
• AutoFact: Target of Myb protein 1 [Arabidopsis thaliana] ref|NP_850833.1| Target of Myb protein 1 [Arabidopsis thaliana] emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] gb|AAL32718.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: target of myb protein 1 0.0
N-terminus
uagpf_v2_unigene1410 uagpf v2.0 443
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene1461 uagpf v2.0 1034
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene2963 uagpf v2.0 426
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene3521 uagpf v2.0 564
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene5198 uagpf v2.0 589
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene5990 uagpf v2.0 418
• AutoFact: VHS and GAT domain protein n=1 Tax=Glycine max RepID=Q2V732_SOYBN 1.0e-15
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 6.98832e-18
N-terminus
uagpf_v2_unigene7182 uagpf v2.0 725
• AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
• Blast2go: microtubule organization protein 0.0
unknown
uagpf_v2_unigene7203 uagpf v2.0 705
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
• Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene8541 uagpf v2.0 1958
• AutoFact: VHS and GAT domain protein [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vhs and gat domain protein 0.0
C-terminus
uagpf_v2_unigene8566 uagpf v2.0 708
• AutoFact: VHS and GAT domain protein [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vhs and gat domain protein 0.0
N-terminus
uagpf_v2_unigene9325 uagpf v2.0 572
• AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable ubiquitin-conjugating enzyme e2 23-like 0.0
Complete
uagpf_v2_unigene10717 uagpf v2.0 378
• AutoFact: Target of Myb protein 1 [Arabidopsis thaliana] ref|NP_850833.1| Target of Myb protein 1 [Arabidopsis thaliana] emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] gb|AAL32718.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: target of myb protein 1 0.0
Internal
uagpf_v2_unigene10850 uagpf v2.0 1492
• AutoFact: Unassigned protein
• FL-Next: sp=VHS domain-containing protein At3g16270; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: vhs domain-containing protein at3g16270-like 0.0
C-terminus
uagpf_v2_unigene12878 uagpf v2.0 771
• AutoFact: Target of Myb protein 1 [Arabidopsis thaliana] ref|NP_850833.1| Target of Myb protein 1 [Arabidopsis thaliana] emb|CAC01701.1| TOM (target of myb1)-like protein [Arabidopsis thaliana] gb|AAL10477.1| AT5g16880/F2K13_30 [Arabidopsis thaliana] gb|AAL32718.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: target of myb protein 1 0.0
C-terminus
uagpf_v2_unigene13064 uagpf v2.0 762
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 1.54143e-44
C-terminus
uagpf_v2_unigene13891 uagpf v2.0 896
• AutoFact: microtubule bundling polypeptide TMBP200 [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: microtubule organization protein 0.0
Complete
uagpf_v2_unigene25004 uagpf v2.0 477
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene25167 uagpf v2.0 553
• AutoFact: putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp|Q9ZVX1.1|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb|AAC64223.1| putative ubiquitin-conjugating enzyme [Arabidop 0.0
• Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain