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Assembly Name: uagpf v2.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene34070 uagpf v2.0 205
AutoFact: RING Zn-finger domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IK69_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene34433 uagpf v2.0 315
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene34696 uagpf v2.0 302
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: sp=Histone deacetylase 18; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
Internal
uagpf_v2_unigene36231 uagpf v2.0 648
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
uagpf_v2_unigene36802 uagpf v2.0 627
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene37019 uagpf v2.0 462
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
N-terminus
uagpf_v2_unigene37352 uagpf v2.0 538
AutoFact: DNA polymerase n=1 Tax=Ricinus communis RepID=B9RF68_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna polymerase zeta catalytic 0.0
Internal
uagpf_v2_unigene37575 uagpf v2.0 408
AutoFact: RING Zn-finger domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IK69_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene37607 uagpf v2.0 468
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
Blast2go: protein 4.582e-37
Coding
uagpf_v2_unigene37967 uagpf v2.0 419
AutoFact: Elongation factor 1-alpha, putative n=1 Tax=Ricinus communis RepID=B9SPP6_RICCO 0.0
FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor 1-alpha 0.0
Putative N-terminus
uagpf_v2_unigene40232 uagpf v2.0 216
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.582e-37
Internal
uagpf_v2_unigene40356 uagpf v2.0 445
AutoFact: splicing factor 1 [Arabidopsis thaliana] ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana] ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana] dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana] gb|AAN13087.1| unknown protein [ 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: splicing factor 1 0.0
Internal
uagpf_v2_unigene40496 uagpf v2.0 354
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
Internal
uagpf_v2_unigene42115 uagpf v2.0 475
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene42990 uagpf v2.0 407
AutoFact: DNA topoisomerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7U9K8_VITVI 9.0e-31
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: dna topoisomerase 3-beta-1-like 1.45692e-32
Internal
uagpf_v2_unigene43431 uagpf v2.0 366
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 5 10 0.0
Putative N-terminus
uagpf_v2_unigene46169 uagpf v2.0 274
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9R9V5_RICCO 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: splicing factor 1 0.0
Internal
uagpf_v2_unigene46835 uagpf v2.0 271
AutoFact: RNA-binding protein-like [Oryza sativa Japonica Group] gb|EEE69405.1| hypothetical protein OsJ_28765 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding 0.0
Internal
uagpf_v2_unigene49249 uagpf v2.0 326
AutoFact: zinc ion binding protein [Arabidopsis thaliana] dbj|BAF00982.1| hypothetical protein [Arabidopsis thaliana] gb|ABM06032.1| At1g55915 [Arabidopsis thaliana] gb|AEE33319.1| zinc ion binding protein [Arabidopsis thaliana] 0.0
Blast2go: zinc ion binding protein 0.0
unknown
uagpf_v2_unigene49269 uagpf v2.0 249
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain