Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, RanBP2-type

Term: IPR001876  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13172 uagpf v2.0 959
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase 0.0
C-terminus
uagpf_v2_unigene14519 uagpf v2.0 1482
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 3.06217e-31
Complete
uagpf_v2_unigene16124 uagpf v2.0 517
AutoFact: rhomboid-like protein 14 [Arabidopsis thaliana] sp|Q8RXW0.1|Y3761_ARATH RecName: Full=Uncharacterized protein At3g17611 gb|AAL85014.1| unknown protein [Arabidopsis thaliana] gb|AAM51269.1| unknown protein [Arabidopsis thaliana] gb|AEE75979.1| rhomboid-lik 0.0
FL-Next: sp=Uncharacterized protein At3g17611; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene16592 uagpf v2.0 439
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.582e-37
Putative Complete
uagpf_v2_unigene16835 uagpf v2.0 401
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: unnamed protein product [Vitis vinifera] 1.98271e-15
N-terminus
uagpf_v2_unigene25449 uagpf v2.0 520
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna-binding protein 5 10 0.0
C-terminus
uagpf_v2_unigene26096 uagpf v2.0 436
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 5.0e-36
Blast2go: protein 0.0
unknown
uagpf_v2_unigene26931 uagpf v2.0 353
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
N-terminus
uagpf_v2_unigene27213 uagpf v2.0 152
AutoFact: putative zinc-finger protein [Oryza sativa Japonica Group] 5.0e-36
Blast2go: protein 0.0
unknown
uagpf_v2_unigene27896 uagpf v2.0 150
AutoFact: zf-RanBP domain containing protein 0.0001
Blast2go: unknown [Picea sitchensis] 1.65587e-29
unknown
uagpf_v2_unigene28894 uagpf v2.0 328
AutoFact: probable histone deacetylase 19 [Zea mays] gb|AAP92528.1|AF322918_1 HDA1 [Zea mays] 0.0
FL-Next: sp=Histone deacetylase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone deacetylase 0.0
N-terminus
uagpf_v2_unigene29154 uagpf v2.0 803
AutoFact: PRP38_assoc multi-domain protein 6.0e-12
Coding
uagpf_v2_unigene30025 uagpf v2.0 403
AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein Sb03g033240; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: rna-binding protein 5 10 0.0
Internal
uagpf_v2_unigene30180 uagpf v2.0 271
AutoFact: RNA-binding protein-like [Oryza sativa Japonica Group] gb|EEE69405.1| hypothetical protein OsJ_28765 [Oryza sativa Japonica Group] 0.0
Blast2go: rna binding 0.0
unknown
uagpf_v2_unigene30853 uagpf v2.0 355
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
Internal
uagpf_v2_unigene30958 uagpf v2.0 256
AutoFact: putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] dbj|BAH19422.1| AT5G10630 [Arabidopsis thaliana] gb|AED91574.1| putative translation elongation factor 2EF1A / eIF-2-gamma [Arabidopsis thaliana] 1.0e-30
FL-Next: tr=Elongation factor 1-alpha, putative; Ricinus communis (Castor bean). 0.0
Blast2go: elongation factor 1-alpha 1.24836e-34
Internal
uagpf_v2_unigene31126 uagpf v2.0 242
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna polymerase zeta catalytic 5.70595e-41
Internal
uagpf_v2_unigene31242 uagpf v2.0 332
AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9RCZ5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein kinase g11a-like 0.0
Internal
uagpf_v2_unigene31350 uagpf v2.0 219
AutoFact: Drf_FH1 multi-domain protein 2.0e-11
Blast2go: tbp-associated factor 15b 0.0
unknown
uagpf_v2_unigene32172 uagpf v2.0 274
AutoFact: Plastid NEP interaction protein n=1 Tax=Nicotiana benthamiana RepID=E2IFI7_NICBE 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nep1-interacting 2-like 2.06151e-12
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain