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Assembly Name: uagpf v2.0

Name: B3 DNA binding domain

Term: IPR003340  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene39125 uagpf v2.0 400
AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response factor-like protein 0.0
N-terminus
uagpf_v2_unigene39611 uagpf v2.0 495
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 7.0e-29
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: vp1 abi3-like protein 0.0
N-terminus
uagpf_v2_unigene40132 uagpf v2.0 441
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene41505 uagpf v2.0 267
AutoFact: ARF-L2 protein (Fragment) n=1 Tax=Ginkgo biloba RepID=D4HTT9_GINBI 0.0
Blast2go: auxin response factor 2 0.0
Putative coding
uagpf_v2_unigene41986 uagpf v2.0 543
AutoFact: Putative auxin response factor 6 n=1 Tax=Amborella trichopoda RepID=E0WD84_AMBTC 0.0
FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
Blast2go: auxin response factor 6-like 0.0
Putative N-terminus
uagpf_v2_unigene42718 uagpf v2.0 360
AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Internal
uagpf_v2_unigene43255 uagpf v2.0 198
AutoFact: zf-CW domain containing protein 2.0e-10
Blast2go: b3 domain-containing protein os07g0679700-like 0.0
unknown
uagpf_v2_unigene43576 uagpf v2.0 354
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
Blast2go: auxin response 0.0
unknown
uagpf_v2_unigene43578 uagpf v2.0 186
AutoFact: AP2/B3 domain-containing transcription factor [Arabidopsis thaliana] sp|Q1G3M3.1|Y3918_ARATH RecName: Full=B3 domain-containing protein At3g19184 gb|ABF59230.1| unknown protein [Arabidopsis thaliana] dbj|BAH30459.1| hypothetical protein [Arabidopsis thali 4.00001e-41
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: b3 domain-containing protein 0.0
N-terminus
uagpf_v2_unigene43926 uagpf v2.0 281
AutoFact: Putative auxin response factor 5/7 (Fragment) n=1 Tax=Gnetum gnemon RepID=E1UHX8_GNEGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: auxin response 0.0
Internal
uagpf_v2_unigene44070 uagpf v2.0 267
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
FL-Next: tr=Transcription factor viviparous 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: abscisic acid-insensitive protein 3 0.0
Internal
uagpf_v2_unigene45759 uagpf v2.0 328
AutoFact: auxin response factor-like protein [Mangifera indica] 0.0
Blast2go: auxin response factor-like protein 0.0
Coding
uagpf_v2_unigene48475 uagpf v2.0 348
AutoFact: Transcription factor viviparous 1 n=1 Tax=Picea abies RepID=Q9FVK1_PICAB 0.0
FL-Next: tr=VP1/ABI3-like protein; Callitropsis nootkatensis. 0.0
Blast2go: abscisic acid-insensitive protein 3 0.0
Internal
uagpf_v2_unigene48741 uagpf v2.0 323
AutoFact: RecName: Full=B3 domain-containing protein LFL1; AltName: Full=LEC2 and FUSCA3-like protein 1; Short=OsLFL1 gb|ABO64645.1| LFL1 [Oryza sativa Japonica Group] 1.0e-30
Blast2go: b3 domain-containing protein 1.39907e-32
Coding
uagpf_v2_unigene48773 uagpf v2.0 337
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ephedra distachya RepID=E1UHX6_EPHDI 0.0
FL-Next: tr=Putative auxin response factor 6/8; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
Blast2go: arf6 0.0
Internal
uagpf_v2_unigene50868 uagpf v2.0 262
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 0.0
Blast2go: nbs lrr 0.0
unknown
uagpf_v2_unigene52082 uagpf v2.0 467
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
FL-Next: sp=Auxin response factor 17; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: auxin response factor 6-like 0.0
C-terminus
uagpf_v2_unigene52666 uagpf v2.0 467
AutoFact: auxin response factor 3 [Cucumis sativus] 0.0
FL-Next: sp=Auxin response factor 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene53447 uagpf v2.0 398
AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
Blast2go: auxin response factor 2 0.0
unknown
uagpf_v2_unigene54515 uagpf v2.0 291
AutoFact: Putative auxin response factor 6/8 n=1 Tax=Ginkgo biloba RepID=E1UHX7_GINBI 0.0
Blast2go: auxin response 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain