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Assembly Name: uagpf v2.0

Name: Pseudouridine synthase I, TruA

Term: IPR001406  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2375 uagpf v2.0 493
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Putative Complete
uagpf_v2_unigene8358 uagpf v2.0 655
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
N-terminus
uagpf_v2_unigene8604 uagpf v2.0 487
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yth domain family protein 0.0
Coding
uagpf_v2_unigene11561 uagpf v2.0 479
AutoFact: tRNA pseudouridine synthase family protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GCD2_CUCME 0.0
Blast2go: trna pseudouridine synthase 0.0
Putative coding
uagpf_v2_unigene11881 uagpf v2.0 2621
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Complete
uagpf_v2_unigene25191 uagpf v2.0 676
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yth domain family protein 0.0
unknown
uagpf_v2_unigene26167 uagpf v2.0 247
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
uagpf_v2_unigene26850 uagpf v2.0 581
AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=E0CQU3_VITVI 1.0e-25
FL-Next: sp=Pseudouridine synthase; Vitis vinifera (Grape). 0.0
Blast2go: trna pseudouridine synthase 2.73189e-38
C-terminus
uagpf_v2_unigene29150 uagpf v2.0 442
AutoFact: RING/c3HC4/PHD zinc finger-like protein [Cucumis melo subsp. melo] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene29650 uagpf v2.0 399
AutoFact: Pseudouridine synthase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJM4_VITVI 3.0e-31
FL-Next: sp=Putative tRNA pseudouridine synthase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: trna pseudouridine synthase-like 9.1229e-37
Internal
uagpf_v2_unigene29736 uagpf v2.0 176
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
C-terminus
uagpf_v2_unigene34740 uagpf v2.0 329
AutoFact: Pseudouridine synthase (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8SNZ9_SELML 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase family protein 0.0
Putative C-terminus
uagpf_v2_unigene44189 uagpf v2.0 294
AutoFact: Pseudouridine synthase n=1 Tax=Picea sitchensis RepID=D5AA47_PICSI 0.0
FL-Next: sp=Pseudouridine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: trna pseudouridine synthase a-like 0.0
Internal
uagpf_v2_unigene51263 uagpf v2.0 516
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Putative N-terminus
uagpf_v2_unigene52838 uagpf v2.0 390
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain