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Assembly Name: uagpf v2.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene39001 uagpf v2.0 483
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase family protein 2.8026e-45
C-terminus
uagpf_v2_unigene42205 uagpf v2.0 443
AutoFact: Myosin_tail_1 multi-domain protein 3.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
Internal
uagpf_v2_unigene42933 uagpf v2.0 298
AutoFact: SINA [Phyllostachys praecox] 0.0
Blast2go: ubiquitin ligase 0.0
unknown
uagpf_v2_unigene43490 uagpf v2.0 208
AutoFact: BTB-POZ and math domain-containing protein [Arabidopsis thaliana] sp|Q8L765.1|BPM1_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 1; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 1; Short=AtBPM1 gb|AAM97116.1| putative protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene45197 uagpf v2.0 410
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
uagpf_v2_unigene47516 uagpf v2.0 311
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Internal
uagpf_v2_unigene48778 uagpf v2.0 384
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 8.47814e-15
N-terminus
uagpf_v2_unigene49815 uagpf v2.0 492
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
unknown
uagpf_v2_unigene49836 uagpf v2.0 446
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
C-terminus
uagpf_v2_unigene51170 uagpf v2.0 504
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 5.00264e-43
Blast2go: ubiquitin carboxyl-terminal hydrolase family protein 2.8026e-45
Coding
uagpf_v2_unigene51385 uagpf v2.0 477
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
C-terminus
uagpf_v2_unigene51640 uagpf v2.0 354
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12 0.0
Internal
uagpf_v2_unigene52808 uagpf v2.0 522
AutoFact: aldehyde dehydrogenase [Vitis pseudoreticulata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: aldehyde dehydrogenase family 2 member mitochondrial-like 0.0
N-terminus
uagpf_v2_unigene53586 uagpf v2.0 390
AutoFact: seven in absentia-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase sinat3 0.0
C-terminus
uagpf_v2_unigene54161 uagpf v2.0 376
AutoFact: zinc finger POZ domain protein [Oryza sativa Japonica Group] 5.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz 9.87888e-22
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain