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Assembly Name: uagpf v2.0

Name: TRAF-type

Term: IPR013322  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene14165 uagpf v2.0 585
AutoFact: BTB-POZ and math domain-containing protein [Arabidopsis thaliana] sp|Q8L765.1|BPM1_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 1; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 1; Short=AtBPM1 gb|AAM97116.1| putative protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene14365 uagpf v2.0 1743
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
C-terminus
uagpf_v2_unigene14800 uagpf v2.0 912
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
uagpf_v2_unigene14949 uagpf v2.0 1807
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
Complete
uagpf_v2_unigene15318 uagpf v2.0 864
AutoFact: SINA [Phyllostachys praecox] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
C-terminus
uagpf_v2_unigene16910 uagpf v2.0 398
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 5.00264e-43
Blast2go: ubiquitin carboxyl-terminal hydrolase family protein 2.8026e-45
Coding
uagpf_v2_unigene17087 uagpf v2.0 407
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene25335 uagpf v2.0 532
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
C-terminus
uagpf_v2_unigene26136 uagpf v2.0 274
AutoFact: putative ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
uagpf_v2_unigene27479 uagpf v2.0 260
AutoFact: ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gb|AED91040.1| ubiq 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12 0.0
unknown
uagpf_v2_unigene27649 uagpf v2.0 279
AutoFact: Myosin_tail_1 multi-domain protein 3.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
C-terminus
uagpf_v2_unigene28152 uagpf v2.0 456
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Putative N-terminus
uagpf_v2_unigene30809 uagpf v2.0 331
AutoFact: BTB/POZ and M4 domain-containing protein [Arabidopsis thaliana] sp|Q9SRV1.1|BPM4_ARATH RecName: Full=BTB/POZ and MATH domain-containing protein 4; AltName: Full=Protein BTB-POZ AND MATH DOMAIN 4; Short=AtBPM4 gb|AAF00643.1|AC009540_20 unknown protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: speckle-type poz protein 0.0
Internal
uagpf_v2_unigene32984 uagpf v2.0 397
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 13; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Internal
uagpf_v2_unigene34842 uagpf v2.0 293
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
uagpf_v2_unigene35770 uagpf v2.0 255
AutoFact: ubiquitin carboxyl-terminal hydrolase [Arabidopsis thaliana] 0.0
FL-Next: Isoform 2 of Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 12-like 0.0
Putative C-terminus
uagpf_v2_unigene36165 uagpf v2.0 496
AutoFact: CM0545.290.nc protein n=1 Tax=Lotus japonicus RepID=B0BLB2_LOTJA 0.0
unknown
uagpf_v2_unigene36180 uagpf v2.0 567
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
C-terminus
uagpf_v2_unigene36271 uagpf v2.0 995
AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
N-terminus
uagpf_v2_unigene36992 uagpf v2.0 394
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain