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Assembly Name: uagpf v2.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2 uagpf v2.0 434
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 0.0
FL-Next: sp=F-box protein At3g54460; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g54460-like 0.0
Internal
uagpf_v2_unigene81 uagpf v2.0 567
AutoFact: Putative multidrug resistance protein n=8 Tax=Poaceae RepID=MDR_ORYSJ 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
uagpf_v2_unigene125 uagpf v2.0 283
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9FKJ0.1|FK132_ARATH RecName: Full=F-box/kelch-repeat protein At5g60570 dbj|BAB08240.1| unnamed protein product [Arabidopsis thaliana] gb|ABM06035.1| At5g60570 [Arabidopsis thaliana] gb|AED97346.1| F-bo 0.0001
Blast2go: f-box kelch-repeat protein at5g60570-like isoform 1 0.0
unknown
uagpf_v2_unigene156 uagpf v2.0 625
AutoFact: ATP-binding cassette transporter, subfamily B, member 18, group MDR/PGP protein PpABCB18 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RU14_PHYPA 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: atp-binding cassette transporter 0.0
Internal
uagpf_v2_unigene245 uagpf v2.0 1560
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q9M8L2.1|FBK30_ARATH RecName: Full=F-box/kelch-repeat protein At1g80440 gb|AAF27130.1|AC018849_18 unknown protein; 76867-75803 [Arabidopsis thaliana] gb|AAL38703.1| unknown protein [Arabidopsis thaliana 1.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 0.0
Complete
uagpf_v2_unigene418 uagpf v2.0 1029
AutoFact: pfam12937, F-box-like, F-box-like 0.0001
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: f-box domain containing protein 0.0
C-terminus
uagpf_v2_unigene420 uagpf v2.0 435
AutoFact: Gag-Pol polyprotein n=4 Tax=Medicago truncatula RepID=B8YLY3_MEDTR 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
Internal
uagpf_v2_unigene497 uagpf v2.0 677
AutoFact: Cyclin-like F-box n=1 Tax=Medicago truncatula RepID=A2Q3U4_MEDTR 0.0
FL-Next: sp=F-box protein At1g10780; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at1g10780-like 0.0
N-terminus
uagpf_v2_unigene499 uagpf v2.0 1127
AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin ligase 0.0
N-terminus
uagpf_v2_unigene767 uagpf v2.0 512
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|O80582.2|FBK46_ARATH RecName: Full=F-box/kelch-repeat protein At2g44130 gb|AAL75886.1| At2g44130/F6E13.26 [Arabidopsis thaliana] gb|AAC23417.2| expressed protein [Arabidopsis thaliana] gb|AAM70552.1| At 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like protein 0.0
N-terminus
uagpf_v2_unigene861 uagpf v2.0 796
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 15-like 0.0
Putative N-terminus
uagpf_v2_unigene880 uagpf v2.0 1932
AutoFact: OSJNBa0058K23.10 protein n=4 Tax=Oryza sativa RepID=Q7XTU2_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
Complete
uagpf_v2_unigene889 uagpf v2.0 1193
AutoFact: Late embryogenesis abundant protein n=2 Tax=Picea RepID=Q40861_PICGL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at4g35930-like 0.0
Putative Complete
uagpf_v2_unigene933 uagpf v2.0 390
AutoFact: F-box protein FBW2 [Arabidopsis thaliana] ref|NP_849346.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_974523.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001078359.1| F-box protein FBW2 [Arabidopsis thaliana] ref|NP_001154215.1| F-box protein 0.0
Blast2go: f-box protein fbw2 0.0
Coding
uagpf_v2_unigene1054 uagpf v2.0 646
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
Putative coding
uagpf_v2_unigene1144 uagpf v2.0 867
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FNK5.1|FB285_ARATH RecName: Full=F-box protein At5g46170 dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana] gb|AAL49842.1| unknown protein [Arabidopsis thaliana] gb|AAN13195.1| unknown protein [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
uagpf_v2_unigene1188 uagpf v2.0 1323
AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9IPU4_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: cationic amino acid transporter 0.0
Putative N-terminus
uagpf_v2_unigene1356 uagpf v2.0 587
AutoFact: lipid-binding serum glycoprotein-like protein [Arabidopsis thaliana] ref|NP_001189939.1| lipid-binding serum glycoprotein-like protein [Arabidopsis thaliana] gb|AEE76354.1| lipid-binding serum glycoprotein-like protein [Arabidopsis thaliana] gb|AEE76356.1 2.99878e-43
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: lipid-binding serum glyco protein 0.0
C-terminus
uagpf_v2_unigene1487 uagpf v2.0 839
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein 0.0
Complete
uagpf_v2_unigene1506 uagpf v2.0 449
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 15-like 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain