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Assembly Name: uagpf v2.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10824 uagpf v2.0 986
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q84WW1.1|FB140_ARATH RecName: Full=F-box protein At3g12350 gb|AAN71924.1| putative F-box protein family [Arabidopsis thaliana] gb|AEE75186.1| F-box protein [Arabidopsis thaliana] 4.0e-39
FL-Next: sp=F-box protein At3g12350; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at3g12350-like 0.0
C-terminus
uagpf_v2_unigene10891 uagpf v2.0 462
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q8RY82.1|FB121_ARATH RecName: Full=F-box protein At2g32560 gb|AAL69504.1| unknown protein [Arabidopsis thaliana] gb|AAM20109.1| unknown protein [Arabidopsis thaliana] gb|AAM62789.1| unknown [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at2g32560-like 0.0
N-terminus
uagpf_v2_unigene10935 uagpf v2.0 471
AutoFact: Grr1, plant, putative n=1 Tax=Ricinus communis RepID=B9SET7_RICCO 0.0
Blast2go: ein3-binding f-box protein 1-like 0.0
unknown
uagpf_v2_unigene10975 uagpf v2.0 224
AutoFact: ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TV53_PHYPA 0.0
FL-Next: tr=ATP-binding cassette transporter, subfamily B, member 10, group ATM protein PpABCB10; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: abc transporter-like protein 0.0
C-terminus
uagpf_v2_unigene11075 uagpf v2.0 428
AutoFact: MAP7 multi-domain protein 1.0e-09
Coding
uagpf_v2_unigene11260 uagpf v2.0 743
AutoFact: BHLH transcription factor PTF1-like protein n=1 Tax=Oryza sativa Japonica Group RepID=Q6EPZ6_ORYSJ 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription factor bhlh66-like 0.0
Putative C-terminus
uagpf_v2_unigene11274 uagpf v2.0 365
AutoFact: SKP1 interacting partner 4 [Arabidopsis thaliana] sp|Q9M2C9.1|SKIP4_ARATH RecName: Full=F-box/kelch-repeat protein SKIP4; AltName: Full=SKP1-interacting partner 4 emb|CAB71065.1| putative protein [Arabidopsis thaliana] gb|ABF18998.1| At3g61350 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene11292 uagpf v2.0 391
AutoFact: Multidrug/pheromone exporter protein n=1 Tax=Hevea brasiliensis RepID=F2YGT1_HEVBR 0.0
FL-Next: tr=MDR-like ABC transporter; Taxus cuspidata (Japanese yew). 0.0
Blast2go: abc transporter b family member 0.0
C-terminus
uagpf_v2_unigene11300 uagpf v2.0 375
AutoFact: O-FucT domain containing protein 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Putative coding
uagpf_v2_unigene11327 uagpf v2.0 916
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q9FNK5.1|FB285_ARATH RecName: Full=F-box protein At5g46170 dbj|BAB08262.1| unnamed protein product [Arabidopsis thaliana] gb|AAL49842.1| unknown protein [Arabidopsis thaliana] gb|AAN13195.1| unknown protein [Arabido 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
uagpf_v2_unigene11379 uagpf v2.0 464
AutoFact: MYB transcription factor MYB93 [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene11415 uagpf v2.0 507
AutoFact: duplicated SANT DNA-binding domain-containing protein [Arabidopsis thaliana] dbj|BAB10001.1| unnamed protein product [Arabidopsis thaliana] gb|AAL59913.1| unknown protein [Arabidopsis thaliana] gb|AAM20221.1| unknown protein [Arabidopsis thaliana] gb|AAS1 0.0
Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene11597 uagpf v2.0 939
AutoFact: F-box protein SKIP17 [Arabidopsis thaliana] sp|Q0WRC9.1|SKI17_ARATH RecName: Full=F-box protein SKIP17; AltName: Full=SKP1-interacting partner 17 dbj|BAF00320.1| hypothetical protein [Arabidopsis thaliana] gb|AEE82223.1| F-box protein SKIP17 [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein 0.0
C-terminus
uagpf_v2_unigene11646 uagpf v2.0 440
AutoFact: kinesin family member 22 [Arabidopsis thaliana] gb|AAX12877.1| At5g02370 [Arabidopsis thaliana] gb|AED90464.1| kinesin family member 22 [Arabidopsis thaliana] 0.0
Blast2go: kinesin-like protein kif22-like 0.0
unknown
uagpf_v2_unigene11802 uagpf v2.0 1154
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q8RY82.1|FB121_ARATH RecName: Full=F-box protein At2g32560 gb|AAL69504.1| unknown protein [Arabidopsis thaliana] gb|AAM20109.1| unknown protein [Arabidopsis thaliana] gb|AAM62789.1| unknown [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at2g32560-like 0.0
C-terminus
uagpf_v2_unigene11808 uagpf v2.0 1797
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene11868 uagpf v2.0 1186
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q3E6P4.1|FB95_ARATH RecName: Full=F-box protein At2g02240 gb|AEC05560.1| F-box protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: skp1-interacting-like protein 0.0
Complete
uagpf_v2_unigene12025 uagpf v2.0 1082
AutoFact: F-box/LRR-repeat protein 15 [Arabidopsis thaliana] sp|Q9SMY8.2|FBL15_ARATH RecName: Full=F-box/LRR-repeat protein 15 gb|AEE86191.1| F-box/LRR-repeat protein 15 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene12078 uagpf v2.0 778
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
Blast2go: tubby-like f-box protein 3 0.0
unknown
uagpf_v2_unigene12092 uagpf v2.0 558
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPK2_PHYPA 0.0
Blast2go: tubby-like f-box protein 3 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain