Sustainpine_db
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Assembly Name: uagpf v2.0

Name: F-box domain, cyclin-like

Term: IPR001810  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3219 uagpf v2.0 413
AutoFact: Glutathione synthetase, chloroplastic n=2 Tax=Brassica RepID=GSHB_BRAJU 0.0
FL-Next: sp=Glutathione synthetase, chloroplastic; Brassica juncea (Indian mustard) (Sinapis juncea). 0.0
Blast2go: glutathione synthetase 0.0
Internal
uagpf_v2_unigene3409 uagpf v2.0 816
AutoFact: putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transferring glycosyl 0.0
Putative Complete
uagpf_v2_unigene3522 uagpf v2.0 910
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SF10_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box lrr-repeat protein 12 0.0
Putative N-terminus
uagpf_v2_unigene3638 uagpf v2.0 444
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9GWX1_POPTR 1.0e-10
Blast2go: f-box protein at3g54460-like 8.54859e-13
unknown
uagpf_v2_unigene3701 uagpf v2.0 756
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
Blast2go: f-box family protein 0.0
Putative coding
uagpf_v2_unigene3824 uagpf v2.0 400
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
Putative coding
uagpf_v2_unigene3840 uagpf v2.0 806
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q8RWD6.1|FB271_ARATH RecName: Full=F-box protein At5g39450 gb|AAM13163.1| unknown protein [Arabidopsis thaliana] gb|AAP68350.1| At5g39450 [Arabidopsis thaliana] gb|AED94434.1| F-box protein [Arabidopsis thaliana] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at5g39450-like 0.0
Putative Complete
uagpf_v2_unigene3933 uagpf v2.0 619
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9SWC2_RICCO 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene4054 uagpf v2.0 1013
AutoFact: F-box/kelch-repeat protein OR23 [Arabidopsis thaliana] sp|Q0V7S6.1|FK125_ARATH RecName: Full=F-box/kelch-repeat protein OR23 gb|ABH04601.1| At4g03030 [Arabidopsis thaliana] gb|AEE82263.1| F-box/kelch-repeat protein OR23 [Arabidopsis thaliana] 0.0
FL-Next: sp=F-box/kelch-repeat protein OR23; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4085 uagpf v2.0 684
AutoFact: F-box/kelch-repeat protein [Arabidopsis thaliana] sp|Q6NPN5.1|FK113_ARATH RecName: Full=F-box/kelch-repeat protein At5g26960 gb|AAR24662.1| At5g26960 [Arabidopsis thaliana] gb|AED93634.1| F-box/kelch-repeat protein [Arabidopsis thaliana] 7.0e-20
FL-Next: sp=F-box/kelch-repeat protein At5g26960; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.46506e-44
C-terminus
uagpf_v2_unigene4102 uagpf v2.0 698
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
FL-Next: tr=TIR1/AFB auxin receptor protein PintaAFB4A; Pinus taeda (Loblolly pine). 0.0
Blast2go: f-box family protein 0.0
Putative N-terminus
uagpf_v2_unigene4134 uagpf v2.0 489
AutoFact: F-box family protein n=2 Tax=Populus trichocarpa RepID=B9IPW7_POPTR 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene4139 uagpf v2.0 574
AutoFact: TIR1/AFB auxin receptor protein PintaAFB4A n=2 Tax=Pinus taeda RepID=C9EHS9_PINTA 0.0
Blast2go: f-box family protein 0.0
unknown
uagpf_v2_unigene4144 uagpf v2.0 929
AutoFact: Cyclin-like F-box [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box family protein 0.0
C-terminus
uagpf_v2_unigene4226 uagpf v2.0 611
AutoFact: [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: regulator of chromosome condensation repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene4357 uagpf v2.0 618
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Putative C-terminus
uagpf_v2_unigene4385 uagpf v2.0 639
AutoFact: Tubby-like protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TE85_PHYPA 7.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like protein 0.0
N-terminus
uagpf_v2_unigene4410 uagpf v2.0 920
AutoFact: F-box family protein n=4 Tax=fabids RepID=B9H7S3_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubby-like f-box protein 8-like 0.0
N-terminus
uagpf_v2_unigene4448 uagpf v2.0 606
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
uagpf_v2_unigene4468 uagpf v2.0 947
AutoFact: Cyclin-like F-box n=1 Tax=Medicago truncatula RepID=A2Q3U4_MEDTR 0.0
FL-Next: sp=F-box protein At1g10780; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein at1g10780-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain